Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Rnf40Q3U319 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Rnf40Q3U319 Gm14669-201ENSMUST00000118841 250 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 Gm13991-201ENSMUST00000120190 648 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 Gm15786-201ENSMUST00000121079 450 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 Gm11688-201ENSMUST00000122145 308 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.79□□□□□ -1.32
Rnf40Q3U319 Gm24130-201ENSMUST00000158536 151 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 Gm24676-201ENSMUST00000158758 75 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 Gm27401-201ENSMUST00000184052 173 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 Gm28234-201ENSMUST00000185657 615 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 Gm29586-207ENSMUST00000189745 615 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 Gm37272-201ENSMUST00000193401 488 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 Gm43418-201ENSMUST00000201334 428 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 Gm45122-201ENSMUST00000206376 784 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC6.79□□□□□ -1.32
Rnf40Q3U319 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 CT010472.1-201ENSMUST00000224000 704 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Rnf40Q3U319 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Rnf40Q3U319 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Rnf40Q3U319 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.79□□□□□ -1.32
Rnf40Q3U319 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Rnf40Q3U319 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Rnf40Q3U319 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Rnf40Q3U319 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Rnf40Q3U319 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Rnf40Q3U319 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Rnf40Q3U319 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Rnf40Q3U319 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Rnf40Q3U319 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Rnf40Q3U319 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Rnf40Q3U319 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Rnf40Q3U319 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm25167-201ENSMUST00000104188 120 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm13406-201ENSMUST00000121991 256 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm25106-201ENSMUST00000122672 134 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm22235-201ENSMUST00000157085 110 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm25156-201ENSMUST00000179809 79 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm24518-201ENSMUST00000180275 94 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm19193-201ENSMUST00000190263 590 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm4332-201ENSMUST00000196114 346 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Igkv13-64-201ENSMUST00000198143 343 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm45005-201ENSMUST00000206640 157 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm18213-201ENSMUST00000207850 178 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.78□□□□□ -1.32
Rnf40Q3U319 AC160031.1-201ENSMUST00000219914 522 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Snora9-201ENSMUST00000082579 133 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 AC124586.1-201ENSMUST00000221673 2795 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.78□□□□□ -1.32
Rnf40Q3U319 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Rnf40Q3U319 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
Rnf40Q3U319 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Rnf40Q3U319 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rnf40Q3U319 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Rnf40Q3U319 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Rnf40Q3U319 Gm7821-201ENSMUST00000117111 788 ntBASIC6.77□□□□□ -1.33
Rnf40Q3U319 Gm12944-201ENSMUST00000119262 463 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms