Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm43443-201ENSMUST00000202337 2393 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
Col9a1Q05722 AC107645.1-201ENSMUST00000228660 1810 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm29488-201ENSMUST00000191427 2402 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col9a1Q05722 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col9a1Q05722 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC6.61□□□□□ -1.35
Col9a1Q05722 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col9a1Q05722 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm43200-201ENSMUST00000200385 2161 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col9a1Q05722 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col9a1Q05722 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col9a1Q05722 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col9a1Q05722 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col9a1Q05722 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col9a1Q05722 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm14627-201ENSMUST00000118931 567 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm12647-201ENSMUST00000118977 265 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm14101-201ENSMUST00000121502 473 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm24997-201ENSMUST00000157910 105 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm22537-201ENSMUST00000158172 199 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm6374-201ENSMUST00000159051 788 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm22114-201ENSMUST00000177756 107 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col9a1Q05722 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col9a1Q05722 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Igkv13-76-201ENSMUST00000197621 347 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm35648-201ENSMUST00000202304 475 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm6112-201ENSMUST00000208037 629 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm45777-201ENSMUST00000213009 301 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm40692-201ENSMUST00000220411 491 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 AC130829.3-201ENSMUST00000222735 154 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm25081-201ENSMUST00000082534 108 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Snora21-201ENSMUST00000082967 137 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm25207-201ENSMUST00000093745 107 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm45477-201ENSMUST00000200213 5498 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col9a1Q05722 Klf10-202ENSMUST00000226363 2917 ntBASIC6.61□□□□□ -1.35
Col9a1Q05722 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col9a1Q05722 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col9a1Q05722 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col9a1Q05722 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col9a1Q05722 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Col9a1Q05722 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.61□□□□□ -1.35
Col9a1Q05722 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col9a1Q05722 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col9a1Q05722 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Col9a1Q05722 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col9a1Q05722 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm4989-201ENSMUST00000118711 749 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm8545-201ENSMUST00000120692 801 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm12486-201ENSMUST00000120887 541 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm13077-201ENSMUST00000121941 484 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm25389-201ENSMUST00000157340 286 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm25605-201ENSMUST00000158364 124 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm10319-202ENSMUST00000159439 846 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm17065-201ENSMUST00000165245 239 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms