Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Col8a1Q00780 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm11908-201ENSMUST00000117755 347 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm13681-201ENSMUST00000117925 210 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm7927-201ENSMUST00000118818 880 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm6884-201ENSMUST00000119318 615 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm14927-201ENSMUST00000120283 454 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm25806-201ENSMUST00000122782 122 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.9□□□□□ -1.63
Col8a1Q00780 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm11507-201ENSMUST00000156462 412 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm22726-201ENSMUST00000158089 179 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm23583-201ENSMUST00000158533 289 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col8a1Q00780 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm3091-201ENSMUST00000163408 484 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm25525-201ENSMUST00000177701 107 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm26178-201ENSMUST00000177706 107 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm7094-201ENSMUST00000178379 366 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm26465-201ENSMUST00000178517 107 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm24317-201ENSMUST00000178536 107 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm25021-201ENSMUST00000179184 107 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm22995-201ENSMUST00000179670 107 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm24424-201ENSMUST00000179714 107 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm24389-201ENSMUST00000179962 107 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm25672-201ENSMUST00000180111 107 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm29105-201ENSMUST00000187256 450 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm29163-201ENSMUST00000188029 107 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm37501-201ENSMUST00000192830 691 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm36998-201ENSMUST00000193205 704 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm44259-201ENSMUST00000204996 298 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm18628-201ENSMUST00000220584 475 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 AC211878.1-201ENSMUST00000221668 474 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 AC154738.7-201ENSMUST00000228606 579 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm23815-201ENSMUST00000083231 107 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Mir412-201ENSMUST00000083636 80 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm23520-201ENSMUST00000093736 107 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col8a1Q00780 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Col8a1Q00780 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm36947-201ENSMUST00000194709 2249 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col8a1Q00780 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col8a1Q00780 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col8a1Q00780 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm42658-201ENSMUST00000197199 1575 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 AC160115.1-201ENSMUST00000224678 1574 ntBASIC4.9□□□□□ -1.63
Col8a1Q00780 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Col8a1Q00780 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col8a1Q00780 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Col8a1Q00780 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col8a1Q00780 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
Col8a1Q00780 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col8a1Q00780 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col8a1Q00780 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col8a1Q00780 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col8a1Q00780 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col8a1Q00780 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col8a1Q00780 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col8a1Q00780 Gm45838-201ENSMUST00000207355 2447 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col8a1Q00780 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm24265-201ENSMUST00000101833 141 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Mir759-201ENSMUST00000103254 98 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm11550-201ENSMUST00000118210 699 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm13866-201ENSMUST00000118901 968 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm15231-201ENSMUST00000119174 447 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm15113-201ENSMUST00000119280 836 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm11625-201ENSMUST00000119535 296 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Atf1-ps-201ENSMUST00000120608 810 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm25781-201ENSMUST00000122527 84 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm5924-201ENSMUST00000132554 871 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm22122-201ENSMUST00000175147 200 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 141.8 ms