Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GdnfP48540 Gm12765-201ENSMUST00000117273 615 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Gm11268-201ENSMUST00000118347 267 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Gm13064-201ENSMUST00000119125 557 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Gm15177-201ENSMUST00000120491 577 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.31□□□□□ -1.56
GdnfP48540 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.31□□□□□ -1.56
GdnfP48540 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
GdnfP48540 Gm3362-201ENSMUST00000148102 466 ntBASIC5.31□□□□□ -1.56
GdnfP48540 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GdnfP48540 Gm22642-201ENSMUST00000175352 252 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Gm21399-201ENSMUST00000180210 597 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.31□□□□□ -1.56
GdnfP48540 Gm27348-201ENSMUST00000184511 170 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Gm2719-201ENSMUST00000191929 444 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Gm6631-201ENSMUST00000193699 559 ntBASIC5.31□□□□□ -1.56
GdnfP48540 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC5.31□□□□□ -1.56
GdnfP48540 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC5.31□□□□□ -1.56
GdnfP48540 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Gm45150-201ENSMUST00000206051 467 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Gm44858-201ENSMUST00000207360 154 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Gm45023-201ENSMUST00000207951 379 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GdnfP48540 Gm7380-201ENSMUST00000211599 466 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC5.31□□□□□ -1.56
GdnfP48540 AC152415.1-201ENSMUST00000213320 440 ntBASIC5.31□□□□□ -1.56
GdnfP48540 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.31□□□□□ -1.56
GdnfP48540 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC5.31□□□□□ -1.56
GdnfP48540 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GdnfP48540 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
GdnfP48540 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Gm11360-201ENSMUST00000221898 262 ntBASIC5.31□□□□□ -1.56
GdnfP48540 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.31□□□□□ -1.56
GdnfP48540 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.31□□□□□ -1.56
GdnfP48540 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
GdnfP48540 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
GdnfP48540 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
GdnfP48540 Mir412-201ENSMUST00000083636 80 ntBASIC5.31□□□□□ -1.56
GdnfP48540 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.31□□□□□ -1.56
GdnfP48540 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
GdnfP48540 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.31□□□□□ -1.56
GdnfP48540 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GdnfP48540 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GdnfP48540 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.31□□□□□ -1.56
GdnfP48540 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.31□□□□□ -1.56
GdnfP48540 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GdnfP48540 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GdnfP48540 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GdnfP48540 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GdnfP48540 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.31□□□□□ -1.56
GdnfP48540 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
GdnfP48540 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
GdnfP48540 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
GdnfP48540 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GdnfP48540 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GdnfP48540 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GdnfP48540 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.3□□□□□ -1.56
GdnfP48540 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
GdnfP48540 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
GdnfP48540 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
GdnfP48540 Gm26340-201ENSMUST00000102365 99 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
GdnfP48540 Snord72-201ENSMUST00000104549 81 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
GdnfP48540 Gm14125-201ENSMUST00000113442 680 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Gm13176-201ENSMUST00000117910 477 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Gm11219-201ENSMUST00000118565 358 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Gm8648-201ENSMUST00000122457 221 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC5.3□□□□□ -1.56
GdnfP48540 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.3□□□□□ -1.56
GdnfP48540 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC5.3□□□□□ -1.56
GdnfP48540 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.3□□□□□ -1.56
GdnfP48540 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GdnfP48540 Gm22791-201ENSMUST00000157232 145 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Gm23674-201ENSMUST00000157473 131 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Gm24499-201ENSMUST00000158446 104 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC5.3□□□□□ -1.56
GdnfP48540 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC5.3□□□□□ -1.56
GdnfP48540 Gm22646-201ENSMUST00000175130 115 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Gm23864-201ENSMUST00000177607 107 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GdnfP48540 Gm4845-201ENSMUST00000179202 562 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Gm28885-201ENSMUST00000185615 563 ntBASIC5.3□□□□□ -1.56
GdnfP48540 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.3□□□□□ -1.56
GdnfP48540 Gm43048-201ENSMUST00000196101 388 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Gm42708-201ENSMUST00000196332 905 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Gm43744-201ENSMUST00000196387 688 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.3□□□□□ -1.56
GdnfP48540 Gm17956-201ENSMUST00000199931 838 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Gm44108-201ENSMUST00000203525 422 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Gm44523-201ENSMUST00000205616 417 ntBASIC5.3□□□□□ -1.56
GdnfP48540 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
GdnfP48540 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GdnfP48540 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms