Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm14292-201ENSMUST00000118761 456 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm11826-201ENSMUST00000118781 438 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm14159-201ENSMUST00000119832 451 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm6446-201ENSMUST00000120604 818 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC6.62□□□□□ -1.35
Rfx1P48377 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC6.62□□□□□ -1.35
Rfx1P48377 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx1P48377 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx1P48377 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx1P48377 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Rfx1P48377 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.62□□□□□ -1.35
Rfx1P48377 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm22307-201ENSMUST00000180019 107 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm28885-201ENSMUST00000185615 563 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Rfx1P48377 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx1P48377 Gm37503-201ENSMUST00000192088 319 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Rfx1P48377 Gm6631-201ENSMUST00000193699 559 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm5694-201ENSMUST00000195648 641 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm43494-201ENSMUST00000197672 388 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC6.62□□□□□ -1.35
Rfx1P48377 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm45026-201ENSMUST00000205292 833 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.62□□□□□ -1.35
Rfx1P48377 Gm45049-201ENSMUST00000207586 591 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm31166-201ENSMUST00000209326 288 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx1P48377 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.62□□□□□ -1.35
Rfx1P48377 AC162931.1-201ENSMUST00000214184 267 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm18703-201ENSMUST00000215318 333 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm3442-201ENSMUST00000216808 710 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 AC139376.1-201ENSMUST00000220056 1250 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 AC155922.1-201ENSMUST00000220100 373 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 AC117588.3-201ENSMUST00000228517 325 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx1P48377 Gm23460-201ENSMUST00000083258 109 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm25859-201ENSMUST00000083710 91 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm25515-201ENSMUST00000083858 157 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx1P48377 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Rfx1P48377 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx1P48377 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
Rfx1P48377 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx1P48377 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Rfx1P48377 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Rfx1P48377 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Rfx1P48377 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx1P48377 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx1P48377 AC153532.2-201ENSMUST00000219753 3844 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Rfx1P48377 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx1P48377 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Rfx1P48377 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm37268-201ENSMUST00000192254 2614 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm24272-201ENSMUST00000102329 98 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC6.61□□□□□ -1.35
Rfx1P48377 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx1P48377 Gm14125-201ENSMUST00000113442 680 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm8424-201ENSMUST00000117716 988 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm7079-201ENSMUST00000119726 171 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm12494-201ENSMUST00000121684 521 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx1P48377 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx1P48377 Gm24441-201ENSMUST00000157235 281 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm22819-201ENSMUST00000157445 303 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm24692-201ENSMUST00000157761 146 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm16125-201ENSMUST00000159003 339 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm20462-201ENSMUST00000172623 408 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm19203-201ENSMUST00000174049 939 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm27148-201ENSMUST00000185086 160 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm29634-201ENSMUST00000188467 696 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm28699-201ENSMUST00000189193 696 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx1P48377 Mir6516-201ENSMUST00000196236 110 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC6.61□□□□□ -1.35
Rfx1P48377 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC6.61□□□□□ -1.35
Rfx1P48377 Gm43954-201ENSMUST00000204634 544 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx1P48377 Gm2676-201ENSMUST00000207279 606 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Gm19880-201ENSMUST00000207731 318 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 AL662807.1-201ENSMUST00000224183 126 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx1P48377 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx1P48377 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Rfx1P48377 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx1P48377 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx1P48377 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.61□□□□□ -1.35
Rfx1P48377 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx1P48377 Gm42860-201ENSMUST00000196492 3991 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx1P48377 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx1P48377 Gm31258-201ENSMUST00000194532 3297 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Rfx1P48377 Gm7905-201ENSMUST00000119933 1386 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Gm6207-201ENSMUST00000120075 1386 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms