Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Cdx2P43241 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Cdx2P43241 Gm25833-201ENSMUST00000104137 133 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Gm13785-201ENSMUST00000119099 690 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Gm15313-201ENSMUST00000119179 282 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Gm15166-201ENSMUST00000120790 385 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Gm14473-201ENSMUST00000122269 557 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Cdx2P43241 Gm23781-201ENSMUST00000157940 308 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Gm22314-201ENSMUST00000158007 281 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Gm16290-201ENSMUST00000161175 474 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Gm16545-201ENSMUST00000161968 463 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Gm29484-201ENSMUST00000186067 324 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Gm28830-201ENSMUST00000188192 213 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.02□□□□□ -1.77
Cdx2P43241 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.02□□□□□ -1.77
Cdx2P43241 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
Cdx2P43241 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Cdx2P43241 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Cdx2P43241 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Cdx2P43241 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Cdx2P43241 Gm37311-201ENSMUST00000195541 2024 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Cdx2P43241 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.02□□□□□ -1.77
Cdx2P43241 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Cdx2P43241 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Cdx2P43241 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Cdx2P43241 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
Cdx2P43241 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Cdx2P43241 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.01□□□□□ -1.77
Cdx2P43241 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Cdx2P43241 Gm24935-201ENSMUST00000103770 110 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Gm23746-201ENSMUST00000104229 125 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Cdx2P43241 Gm6754-201ENSMUST00000117124 913 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Gm14299-201ENSMUST00000117586 397 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Gm15553-201ENSMUST00000118757 430 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Gm24850-201ENSMUST00000158029 119 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Gm10357-201ENSMUST00000159886 264 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Cdx2P43241 Gm27036-201ENSMUST00000182465 980 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Gm29408-201ENSMUST00000187536 216 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Gm42539-201ENSMUST00000197009 308 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Gm42451-201ENSMUST00000197410 244 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Cdx2P43241 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Cdx2P43241 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Cdx2P43241 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.01□□□□□ -1.77
Cdx2P43241 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Cdx2P43241 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.01□□□□□ -1.77
Cdx2P43241 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
Cdx2P43241 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Cdx2P43241 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.01□□□□□ -1.77
Cdx2P43241 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Cdx2P43241 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Cdx2P43241 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Cdx2P43241 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Cdx2P43241 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Cdx2P43241 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.01□□□□□ -1.77
Cdx2P43241 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.01□□□□□ -1.77
Cdx2P43241 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Cdx2P43241 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Cdx2P43241 Gm26418-201ENSMUST00000104275 137 ntBASIC4□□□□□ -1.77
Cdx2P43241 Gm11393-201ENSMUST00000118019 288 ntBASIC4□□□□□ -1.77
Cdx2P43241 Gm22958-201ENSMUST00000122512 184 ntBASIC4□□□□□ -1.77
Cdx2P43241 Gm22514-201ENSMUST00000122547 308 ntBASIC4□□□□□ -1.77
Cdx2P43241 Gm23617-201ENSMUST00000175410 95 ntBASIC4□□□□□ -1.77
Cdx2P43241 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cdx2P43241 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4□□□□□ -1.77
Cdx2P43241 Mir6418-201ENSMUST00000185075 115 ntBASIC4□□□□□ -1.77
Cdx2P43241 Gm18558-201ENSMUST00000186253 1214 ntBASIC4□□□□□ -1.77
Cdx2P43241 Gm42566-201ENSMUST00000197120 643 ntBASIC4□□□□□ -1.77
Cdx2P43241 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4□□□□□ -1.77
Cdx2P43241 Gm7786-201ENSMUST00000210494 436 ntBASIC4□□□□□ -1.77
Cdx2P43241 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
Cdx2P43241 AL590503.1-201ENSMUST00000222053 321 ntBASIC4□□□□□ -1.77
Cdx2P43241 CU024892.1-201ENSMUST00000224869 515 ntBASIC4□□□□□ -1.77
Cdx2P43241 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Cdx2P43241 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC4□□□□□ -1.77
Cdx2P43241 Mir34b-201ENSMUST00000083558 84 ntBASIC4□□□□□ -1.77
Cdx2P43241 Gm4991-201ENSMUST00000118899 1552 ntBASIC4□□□□□ -1.77
Cdx2P43241 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Cdx2P43241 Gm17752-201ENSMUST00000185787 3726 ntBASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms