Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC154634.3-201ENSMUST00000224589 736 ntBASIC4.16□□□□□ -1.74
HttP42859 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.16□□□□□ -1.74
HttP42859 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HttP42859 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HttP42859 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.16□□□□□ -1.74
HttP42859 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
HttP42859 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.16□□□□□ -1.74
HttP42859 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HttP42859 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HttP42859 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.16□□□□□ -1.74
HttP42859 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HttP42859 AC131068.3-201ENSMUST00000228438 1456 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm14825-201ENSMUST00000113538 701 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm22601-201ENSMUST00000157595 250 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm26214-201ENSMUST00000158581 107 ntBASIC4.16□□□□□ -1.74
HttP42859 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HttP42859 Gm28781-201ENSMUST00000185760 696 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm28339-201ENSMUST00000185845 696 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm29574-201ENSMUST00000186226 696 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm28828-201ENSMUST00000186601 696 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm29307-201ENSMUST00000187367 696 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm28896-201ENSMUST00000188609 696 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm29339-201ENSMUST00000189613 696 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm28159-201ENSMUST00000190296 696 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm29407-201ENSMUST00000191468 696 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm38107-201ENSMUST00000194873 696 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.16□□□□□ -1.74
HttP42859 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
HttP42859 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
HttP42859 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HttP42859 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HttP42859 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HttP42859 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HttP42859 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HttP42859 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
HttP42859 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC4.15□□□□□ -1.74
HttP42859 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HttP42859 Gm12793-201ENSMUST00000119268 292 ntBASIC4.15□□□□□ -1.74
HttP42859 Gm24014-201ENSMUST00000157728 157 ntBASIC4.15□□□□□ -1.74
HttP42859 Gm28094-201ENSMUST00000185262 390 ntBASIC4.15□□□□□ -1.74
HttP42859 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC4.15□□□□□ -1.74
HttP42859 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
HttP42859 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
HttP42859 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HttP42859 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HttP42859 AC144783.2-201ENSMUST00000219089 195 ntBASIC4.15□□□□□ -1.75
HttP42859 Gm272-201ENSMUST00000222073 919 ntBASIC4.15□□□□□ -1.75
HttP42859 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.15□□□□□ -1.75
HttP42859 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HttP42859 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC4.15□□□□□ -1.75
HttP42859 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
HttP42859 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
HttP42859 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HttP42859 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
HttP42859 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
HttP42859 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.15□□□□□ -1.75
HttP42859 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
HttP42859 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HttP42859 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HttP42859 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HttP42859 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.15□□□□□ -1.75
HttP42859 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC4.15□□□□□ -1.75
HttP42859 Gm23773-201ENSMUST00000158985 296 ntBASIC4.15□□□□□ -1.75
HttP42859 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.15□□□□□ -1.75
HttP42859 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.15□□□□□ -1.75
HttP42859 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.15□□□□□ -1.75
HttP42859 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.15□□□□□ -1.75
HttP42859 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
HttP42859 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HttP42859 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HttP42859 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.14□□□□□ -1.75
HttP42859 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HttP42859 AC164092.3-201ENSMUST00000216970 1323 ntBASIC4.14□□□□□ -1.75
HttP42859 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC4.14□□□□□ -1.75
HttP42859 Gm26373-201ENSMUST00000157833 103 ntBASIC4.14□□□□□ -1.75
HttP42859 Gm43005-201ENSMUST00000199015 648 ntBASIC4.14□□□□□ -1.75
HttP42859 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.14□□□□□ -1.75
HttP42859 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HttP42859 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
HttP42859 AC165260.6-205ENSMUST00000224190 9762 ntBASIC4.14□□□□□ -1.75
HttP42859 Gm37056-201ENSMUST00000192141 1865 ntBASIC4.14□□□□□ -1.75
HttP42859 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC4.14□□□□□ -1.75
HttP42859 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.14□□□□□ -1.75
HttP42859 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HttP42859 Gm26254-201ENSMUST00000122491 118 ntBASIC4.14□□□□□ -1.75
HttP42859 Gm22538-201ENSMUST00000158169 299 ntBASIC4.14□□□□□ -1.75
HttP42859 Gm23380-201ENSMUST00000158448 103 ntBASIC4.14□□□□□ -1.75
HttP42859 Gm18352-201ENSMUST00000189113 902 ntBASIC4.14□□□□□ -1.75
HttP42859 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.14□□□□□ -1.75
HttP42859 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.14□□□□□ -1.75
HttP42859 Gm44256-201ENSMUST00000203304 335 ntBASIC4.14□□□□□ -1.75
HttP42859 Gm44084-201ENSMUST00000203947 409 ntBASIC4.14□□□□□ -1.75
HttP42859 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HttP42859 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HttP42859 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC4.14□□□□□ -1.75
HttP42859 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.14□□□□□ -1.75
HttP42859 Mir30e-201ENSMUST00000083475 92 ntBASIC4.14□□□□□ -1.75
HttP42859 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
HttP42859 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HttP42859 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 136.1 ms