Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Traf1P39428 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Traf1P39428 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Traf1P39428 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Traf1P39428 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Traf1P39428 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Traf1P39428 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Traf1P39428 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Traf1P39428 Gm14628-201ENSMUST00000117508 635 ntBASIC5.25□□□□□ -1.57
Traf1P39428 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC5.25□□□□□ -1.57
Traf1P39428 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.25□□□□□ -1.57
Traf1P39428 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Traf1P39428 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Traf1P39428 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Traf1P39428 Gm27883-201ENSMUST00000183941 102 ntBASIC5.25□□□□□ -1.57
Traf1P39428 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Traf1P39428 Gm29484-201ENSMUST00000186067 324 ntBASIC5.25□□□□□ -1.57
Traf1P39428 Gm29534-201ENSMUST00000187328 382 ntBASIC5.25□□□□□ -1.57
Traf1P39428 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.25□□□□□ -1.57
Traf1P39428 Gm8069-201ENSMUST00000197887 154 ntBASIC5.25□□□□□ -1.57
Traf1P39428 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Traf1P39428 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC5.25□□□□□ -1.57
Traf1P39428 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.25□□□□□ -1.57
Traf1P39428 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC5.25□□□□□ -1.57
Traf1P39428 Olfr790-204ENSMUST00000218901 1070 ntBASIC5.25□□□□□ -1.57
Traf1P39428 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5.25□□□□□ -1.57
Traf1P39428 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Traf1P39428 Gm16415-201ENSMUST00000080097 489 ntBASIC5.25□□□□□ -1.57
Traf1P39428 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Traf1P39428 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Traf1P39428 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.25□□□□□ -1.57
Traf1P39428 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Traf1P39428 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
Traf1P39428 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Traf1P39428 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Traf1P39428 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Traf1P39428 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.24□□□□□ -1.57
Traf1P39428 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Traf1P39428 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Traf1P39428 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Traf1P39428 Snord66-201ENSMUST00000104051 75 ntBASIC5.24□□□□□ -1.57
Traf1P39428 Gm12387-201ENSMUST00000118573 955 ntBASIC5.24□□□□□ -1.57
Traf1P39428 Gm15385-201ENSMUST00000118725 667 ntBASIC5.24□□□□□ -1.57
Traf1P39428 Gm14784-201ENSMUST00000121604 663 ntBASIC5.24□□□□□ -1.57
Traf1P39428 Gm5924-201ENSMUST00000132554 871 ntBASIC5.24□□□□□ -1.57
Traf1P39428 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Traf1P39428 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Traf1P39428 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Traf1P39428 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Traf1P39428 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.24□□□□□ -1.57
Traf1P39428 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC5.24□□□□□ -1.57
Traf1P39428 Gm20657-201ENSMUST00000177079 515 ntBASIC5.24□□□□□ -1.57
Traf1P39428 Gm19200-201ENSMUST00000182579 1001 ntBASIC5.24□□□□□ -1.57
Traf1P39428 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Traf1P39428 Gm28615-201ENSMUST00000187527 482 ntBASIC5.24□□□□□ -1.57
Traf1P39428 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.24□□□□□ -1.57
Traf1P39428 Gm44054-201ENSMUST00000203814 372 ntBASIC5.24□□□□□ -1.57
Traf1P39428 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC5.24□□□□□ -1.57
Traf1P39428 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.24□□□□□ -1.57
Traf1P39428 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.24□□□□□ -1.57
Traf1P39428 Gm45392-201ENSMUST00000210441 214 ntBASIC5.24□□□□□ -1.57
Traf1P39428 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Traf1P39428 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC5.24□□□□□ -1.57
Traf1P39428 Gm8724-201ENSMUST00000081668 483 ntBASIC5.24□□□□□ -1.57
Traf1P39428 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
Traf1P39428 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.24□□□□□ -1.57
Traf1P39428 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Traf1P39428 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Traf1P39428 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Traf1P39428 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Traf1P39428 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.23□□□□□ -1.57
Traf1P39428 AC149294.7-201ENSMUST00000227475 1432 ntBASIC5.23□□□□□ -1.57
Traf1P39428 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.23□□□□□ -1.57
Traf1P39428 Gm7195-201ENSMUST00000190869 1707 ntBASIC5.23□□□□□ -1.57
Traf1P39428 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Traf1P39428 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5.23□□□□□ -1.57
Traf1P39428 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.23□□□□□ -1.57
Traf1P39428 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Traf1P39428 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Traf1P39428 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Traf1P39428 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Traf1P39428 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Traf1P39428 Gm14352-201ENSMUST00000119250 449 ntBASIC5.23□□□□□ -1.57
Traf1P39428 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC5.23□□□□□ -1.57
Traf1P39428 Gm13677-201ENSMUST00000120739 595 ntBASIC5.23□□□□□ -1.57
Traf1P39428 Gm13232-201ENSMUST00000121816 632 ntBASIC5.23□□□□□ -1.57
Traf1P39428 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.23□□□□□ -1.57
Traf1P39428 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC5.23□□□□□ -1.57
Traf1P39428 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Traf1P39428 Gm23465-201ENSMUST00000157134 262 ntBASIC5.23□□□□□ -1.57
Traf1P39428 Gm16571-201ENSMUST00000159112 291 ntBASIC5.23□□□□□ -1.57
Traf1P39428 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Traf1P39428 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Traf1P39428 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC5.23□□□□□ -1.57
Traf1P39428 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Traf1P39428 Gm29228-201ENSMUST00000185489 418 ntBASIC5.23□□□□□ -1.57
Traf1P39428 Gm28439-201ENSMUST00000187714 876 ntBASIC5.23□□□□□ -1.57
Traf1P39428 Gm37193-201ENSMUST00000193087 513 ntBASIC5.23□□□□□ -1.57
Traf1P39428 Gm36954-201ENSMUST00000195362 363 ntBASIC5.23□□□□□ -1.57
Traf1P39428 Gm44779-201ENSMUST00000206937 708 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms