Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Chmp6P0C0A3 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Chmp6P0C0A3 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.61□□□□□ -1.67
Chmp6P0C0A3 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Chmp6P0C0A3 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.61□□□□□ -1.67
Chmp6P0C0A3 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Chmp6P0C0A3 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Chmp6P0C0A3 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Chmp6P0C0A3 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
Chmp6P0C0A3 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Chmp6P0C0A3 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Chmp6P0C0A3 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Chmp6P0C0A3 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Mir761-201ENSMUST00000103245 76 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm16082-201ENSMUST00000115992 377 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm14229-201ENSMUST00000121178 850 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm14122-201ENSMUST00000122076 973 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm10444-201ENSMUST00000126708 148 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm26352-201ENSMUST00000158223 125 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm24939-201ENSMUST00000158325 137 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm25605-201ENSMUST00000158364 124 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm3191-201ENSMUST00000167139 346 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm17421-201ENSMUST00000167845 674 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm8221-201ENSMUST00000178052 564 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm44023-201ENSMUST00000203710 469 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm45006-201ENSMUST00000206078 690 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm45434-201ENSMUST00000210550 293 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 AC162376.1-201ENSMUST00000220120 435 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 AC125190.2-201ENSMUST00000221160 497 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm23099-201ENSMUST00000083454 139 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Mir28a-201ENSMUST00000083560 86 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Chmp6P0C0A3 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm14365-201ENSMUST00000117535 587 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm14885-201ENSMUST00000117969 496 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm11510-201ENSMUST00000120278 347 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm22730-201ENSMUST00000158085 171 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm16318-201ENSMUST00000162402 601 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm17060-201ENSMUST00000172394 824 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm27044-201ENSMUST00000183033 796 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Mir6391-201ENSMUST00000184391 104 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm27611-201ENSMUST00000184690 108 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm29552-201ENSMUST00000190548 660 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 AC110816.1-201ENSMUST00000218559 980 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm46996-201ENSMUST00000220924 408 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Gm19134-201ENSMUST00000221203 487 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms