Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm19214-201ENSMUST00000191956 1083 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm33571-201ENSMUST00000193271 657 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC5.07□□□□□ -1.6
Col3a1P08121 Gm43586-201ENSMUST00000195948 310 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm43315-201ENSMUST00000198120 313 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Trdv3-201ENSMUST00000198551 309 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm43596-201ENSMUST00000202818 884 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col3a1P08121 AC154374.1-201ENSMUST00000215351 351 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 AC158392.1-201ENSMUST00000223720 1069 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 AC164597.2-201ENSMUST00000226738 603 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col3a1P08121 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col3a1P08121 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Col3a1P08121 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col3a1P08121 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col3a1P08121 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col3a1P08121 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Col3a1P08121 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Col3a1P08121 AC121997.2-203ENSMUST00000228613 4192 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col3a1P08121 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col3a1P08121 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col3a1P08121 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col3a1P08121 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col3a1P08121 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col3a1P08121 Gm18359-201ENSMUST00000173024 1459 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col3a1P08121 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col3a1P08121 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col3a1P08121 Gm15916-201ENSMUST00000118355 736 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm13678-201ENSMUST00000118926 340 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm12885-201ENSMUST00000122246 328 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm26036-201ENSMUST00000158149 144 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col3a1P08121 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col3a1P08121 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Mir3058-201ENSMUST00000175126 91 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col3a1P08121 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col3a1P08121 Gm10292-201ENSMUST00000183142 581 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm28267-201ENSMUST00000191093 265 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col3a1P08121 Gm18985-201ENSMUST00000196472 1079 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm18330-201ENSMUST00000199246 547 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC5.07□□□□□ -1.6
Col3a1P08121 Gm44765-201ENSMUST00000206927 601 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Col3a1P08121 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC5.07□□□□□ -1.6
Col3a1P08121 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.07□□□□□ -1.6
Col3a1P08121 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col3a1P08121 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col3a1P08121 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col3a1P08121 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
Col3a1P08121 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col3a1P08121 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col3a1P08121 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col3a1P08121 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Gm23319-201ENSMUST00000104467 131 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Gm15403-201ENSMUST00000119343 1227 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Gm13902-201ENSMUST00000120168 605 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.06□□□□□ -1.6
Col3a1P08121 Gm23098-201ENSMUST00000157552 299 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Gm23782-201ENSMUST00000157939 120 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Gm24850-201ENSMUST00000158029 119 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Gm10357-201ENSMUST00000159886 264 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Gm27773-201ENSMUST00000184087 78 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Gm29634-201ENSMUST00000188467 696 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Gm28699-201ENSMUST00000189193 696 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC5.06□□□□□ -1.6
Col3a1P08121 Gm43814-201ENSMUST00000197851 413 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Gm7468-201ENSMUST00000203900 652 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Gm8820-201ENSMUST00000204077 571 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 AC122305.2-201ENSMUST00000215148 834 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col3a1P08121 AC162934.3-201ENSMUST00000223015 841 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 AC131100.2-201ENSMUST00000227701 998 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col3a1P08121 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col3a1P08121 AC156025.1-201ENSMUST00000223597 3551 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col3a1P08121 Gm38235-201ENSMUST00000194600 4952 ntBASIC5.06□□□□□ -1.6
Col3a1P08121 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col3a1P08121 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col3a1P08121 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col3a1P08121 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
Col3a1P08121 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col3a1P08121 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col3a1P08121 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col3a1P08121 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col3a1P08121 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col3a1P08121 Mir669l-201ENSMUST00000103771 98 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms