Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmgb3O54879 Mir3106-201ENSMUST00000175401 82 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm23450-201ENSMUST00000178285 91 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC3.34□□□□□ -1.87
Hmgb3O54879 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm29634-201ENSMUST00000188467 696 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm28699-201ENSMUST00000189193 696 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm36994-201ENSMUST00000192941 492 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm8774-201ENSMUST00000203621 692 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm5876-201ENSMUST00000203735 243 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm17737-201ENSMUST00000210183 1147 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm45735-201ENSMUST00000212779 319 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hmgb3O54879 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm18891-201ENSMUST00000216734 1087 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC3.34□□□□□ -1.87
Hmgb3O54879 AC105407.3-201ENSMUST00000224161 648 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 CT009600.1-201ENSMUST00000228771 337 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 Mir188-201ENSMUST00000083464 68 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Hmgb3O54879 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.34□□□□□ -1.87
Hmgb3O54879 Gm43374-201ENSMUST00000202498 2391 ntBASIC3.34□□□□□ -1.87
Hmgb3O54879 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmgb3O54879 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Hmgb3O54879 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Hmgb3O54879 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Hmgb3O54879 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.34□□□□□ -1.88
Hmgb3O54879 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Hmgb3O54879 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Hmgb3O54879 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Hmgb3O54879 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm38104-201ENSMUST00000195121 1895 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm23014-201ENSMUST00000104144 130 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm13478-201ENSMUST00000118312 413 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm15916-201ENSMUST00000118355 736 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm15377-201ENSMUST00000119594 246 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm13687-201ENSMUST00000119857 282 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm15225-201ENSMUST00000120449 1017 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm13868-201ENSMUST00000122411 294 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm22870-201ENSMUST00000157501 112 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm23591-201ENSMUST00000157663 286 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm23225-201ENSMUST00000158121 114 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm23702-201ENSMUST00000158840 130 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm17109-201ENSMUST00000163985 358 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm20401-201ENSMUST00000173717 212 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Hmgb3O54879 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm38221-201ENSMUST00000195146 365 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm44456-201ENSMUST00000196554 89 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm43237-201ENSMUST00000196835 1044 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Mir1892-201ENSMUST00000197752 80 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm43919-201ENSMUST00000204303 364 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm45031-201ENSMUST00000206800 288 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm9616-201ENSMUST00000221154 781 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Hmgb3O54879 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm45322-201ENSMUST00000211642 1361 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Hmgb3O54879 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Hmgb3O54879 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Hmgb3O54879 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Hmgb3O54879 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm45697-201ENSMUST00000212893 2876 ntBASIC3.33□□□□□ -1.88
Hmgb3O54879 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Hmgb3O54879 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Hmgb3O54879 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Hmgb3O54879 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
Hmgb3O54879 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Hmgb3O54879 Mir1188-201ENSMUST00000116756 120 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm14816-201ENSMUST00000117174 294 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm11408-201ENSMUST00000117889 519 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Mup-ps18-201ENSMUST00000120145 531 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm13743-201ENSMUST00000121486 724 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm15171-201ENSMUST00000122191 334 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Hmgb3O54879 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm26001-201ENSMUST00000157989 103 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms