Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Gm11600-201ENSMUST00000119592 240 ntBASIC3.41□□□□□ -1.86
Col6a4A2AX52 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Gm4725-201ENSMUST00000151048 587 ntBASIC3.41□□□□□ -1.86
Col6a4A2AX52 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a4A2AX52 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.41□□□□□ -1.86
Col6a4A2AX52 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Gm43730-201ENSMUST00000199863 372 ntBASIC3.41□□□□□ -1.86
Col6a4A2AX52 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Col6a4A2AX52 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Col6a4A2AX52 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
Col6a4A2AX52 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
Col6a4A2AX52 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Col6a4A2AX52 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Col6a4A2AX52 Gm10241-201ENSMUST00000117664 286 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 Gm13690-201ENSMUST00000118989 285 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 Gm11982-201ENSMUST00000121480 314 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 n-R5s201-201ENSMUST00000122622 116 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 Gm25714-201ENSMUST00000158626 296 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 Gm23365-201ENSMUST00000175019 125 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 Gm25960-201ENSMUST00000175110 125 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 Gm44453-201ENSMUST00000175161 126 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 Gm25195-201ENSMUST00000177656 126 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 Gm23443-201ENSMUST00000082916 128 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Col6a4A2AX52 Gm42946-201ENSMUST00000196108 2570 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC3.4□□□□□ -1.87
Col6a4A2AX52 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Col6a4A2AX52 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC3.4□□□□□ -1.87
Col6a4A2AX52 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Col6a4A2AX52 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Col6a4A2AX52 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Col6a4A2AX52 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC3.4□□□□□ -1.87
Col6a4A2AX52 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Col6a4A2AX52 Gm11325-201ENSMUST00000119967 469 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm14605-201ENSMUST00000120599 268 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm22601-201ENSMUST00000157595 250 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm21232-201ENSMUST00000182187 1006 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm27036-201ENSMUST00000182465 980 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm18011-201ENSMUST00000203717 565 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm44389-201ENSMUST00000203795 182 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm7639-201ENSMUST00000212608 484 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.39□□□□□ -1.87
Col6a4A2AX52 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm23518-201ENSMUST00000082835 153 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm44518-201ENSMUST00000208080 4370 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm37140-201ENSMUST00000192914 1684 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm23540-201ENSMUST00000157543 164 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 Mir6993-201ENSMUST00000184912 65 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm37030-201ENSMUST00000194254 295 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm43856-201ENSMUST00000197004 369 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm19219-201ENSMUST00000215863 724 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Gm38057-201ENSMUST00000195551 3203 ntBASIC3.39□□□□□ -1.87
Col6a4A2AX52 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col6a4A2AX52 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Col6a4A2AX52 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.38□□□□□ -1.87
Col6a4A2AX52 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.38□□□□□ -1.87
Col6a4A2AX52 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Col6a4A2AX52 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Col6a4A2AX52 Gm10059-201ENSMUST00000131139 171 ntBASIC3.38□□□□□ -1.87
Col6a4A2AX52 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.38□□□□□ -1.87
Col6a4A2AX52 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC3.38□□□□□ -1.87
Col6a4A2AX52 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Col6a4A2AX52 Gm10067-201ENSMUST00000179462 348 ntBASIC3.38□□□□□ -1.87
Col6a4A2AX52 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.38□□□□□ -1.87
Col6a4A2AX52 Mir6385-201ENSMUST00000184295 105 ntBASIC3.38□□□□□ -1.87
Col6a4A2AX52 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC3.38□□□□□ -1.87
Col6a4A2AX52 Gm43232-201ENSMUST00000201346 364 ntBASIC3.38□□□□□ -1.87
Col6a4A2AX52 Gm32381-201ENSMUST00000203192 476 ntBASIC3.38□□□□□ -1.87
Col6a4A2AX52 Gm19908-201ENSMUST00000204684 391 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms