Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm36985-201ENSMUST00000195595 379 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm42830-201ENSMUST00000196642 313 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm45078-201ENSMUST00000205343 546 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm36371-201ENSMUST00000209043 1103 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm45651-201ENSMUST00000210857 335 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm45857-201ENSMUST00000212207 356 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 AC151907.1-201ENSMUST00000228812 412 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm23014-201ENSMUST00000104144 130 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm24608-201ENSMUST00000104381 136 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm14621-201ENSMUST00000117709 689 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Mup-ps21-201ENSMUST00000119998 448 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm12466-201ENSMUST00000121199 620 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm13508-201ENSMUST00000121639 775 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm14500-201ENSMUST00000121647 113 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm13092-201ENSMUST00000136346 260 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm25665-201ENSMUST00000157695 110 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm24689-201ENSMUST00000157760 104 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm26085-201ENSMUST00000157900 116 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm37881-201ENSMUST00000193001 421 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm37095-201ENSMUST00000195421 205 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm44474-201ENSMUST00000196525 127 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm43841-201ENSMUST00000199491 586 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm45006-201ENSMUST00000206078 690 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm45228-201ENSMUST00000206585 352 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm45072-201ENSMUST00000208673 929 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm18442-201ENSMUST00000220925 639 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 CT030254.3-201ENSMUST00000225959 1231 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm23058-201ENSMUST00000093703 107 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm10794-201ENSMUST00000099624 207 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.2□□□□□ -1.74
Trim3Q9R1R2 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm22498-201ENSMUST00000104497 86 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Zakit-201ENSMUST00000157677 308 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm18522-201ENSMUST00000173947 650 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm29320-201ENSMUST00000185235 615 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm29179-202ENSMUST00000186138 615 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms