Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm37407-201ENSMUST00000194793 1316 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.09□□□□□ -1.76
Cdc40Q9DC48 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Cdc40Q9DC48 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Cdc40Q9DC48 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm11673-201ENSMUST00000117846 331 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm15075-201ENSMUST00000122187 477 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm5258-201ENSMUST00000165437 327 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm25037-201ENSMUST00000175418 110 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Mir6975-201ENSMUST00000184879 61 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm42999-201ENSMUST00000198049 786 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm4734-201ENSMUST00000200117 777 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm44389-201ENSMUST00000203795 182 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm44234-201ENSMUST00000204246 900 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm18899-201ENSMUST00000217663 546 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm23677-201ENSMUST00000083156 104 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.08□□□□□ -1.76
Cdc40Q9DC48 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm15785-201ENSMUST00000119145 694 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm5942-201ENSMUST00000120046 439 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm22968-201ENSMUST00000157955 118 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm3030-201ENSMUST00000163410 516 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm3339-201ENSMUST00000163462 475 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm27864-201ENSMUST00000183704 190 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm21742-201ENSMUST00000189352 548 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm29097-201ENSMUST00000190273 422 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm37601-201ENSMUST00000194922 394 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm36997-201ENSMUST00000195090 707 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm44403-201ENSMUST00000198554 129 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm45608-201ENSMUST00000210948 389 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm19269-201ENSMUST00000211401 804 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm2059-201ENSMUST00000212025 287 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 AC159819.1-201ENSMUST00000213911 328 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.07□□□□□ -1.76
Cdc40Q9DC48 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms