Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Mir3473g-201ENSMUST00000183494 136 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm27317-201ENSMUST00000183533 95 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm18727-201ENSMUST00000185981 553 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm19029-201ENSMUST00000189923 564 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm42818-201ENSMUST00000198869 987 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm2623-201ENSMUST00000199229 286 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm18252-203ENSMUST00000215855 757 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm4052-201ENSMUST00000220890 451 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 AC117814.1-201ENSMUST00000226135 352 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 AC118639.1-204ENSMUST00000226401 694 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm6776-201ENSMUST00000057752 900 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm20679-201ENSMUST00000177285 1402 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm14365-201ENSMUST00000117535 587 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm6568-201ENSMUST00000122274 697 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm22959-201ENSMUST00000122514 303 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm23228-201ENSMUST00000157296 270 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Spanxn4-201ENSMUST00000172433 424 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Mir5106-201ENSMUST00000174936 73 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm16531-201ENSMUST00000180658 967 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm38329-201ENSMUST00000193473 427 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm38080-201ENSMUST00000194035 268 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm42622-201ENSMUST00000197229 355 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 AC116726.2-201ENSMUST00000217629 986 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 AC124569.1-201ENSMUST00000225932 101 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 AC154727.1-201ENSMUST00000226537 499 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Olfr881-201ENSMUST00000074611 948 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm24254-201ENSMUST00000083702 104 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim8Q99PJ2 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.27□□□□□ -1.57
Trim8Q99PJ2 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms