Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm25179-201ENSMUST00000122632 128 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm26490-201ENSMUST00000157879 140 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm23773-201ENSMUST00000158985 296 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm15974-201ENSMUST00000159103 531 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm17086-201ENSMUST00000171346 484 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm26731-201ENSMUST00000180683 543 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Mir7222-201ENSMUST00000183740 75 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm9320-201ENSMUST00000184151 473 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm28976-201ENSMUST00000188070 144 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm43104-201ENSMUST00000197234 311 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm17775-201ENSMUST00000198542 258 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm44404-201ENSMUST00000203979 636 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Msh4Q99MT2 AC115047.1-201ENSMUST00000213795 322 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm9512-201ENSMUST00000223112 497 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 AC167669.3-201ENSMUST00000224720 393 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 AC164116.2-201ENSMUST00000225398 1038 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Mir342-201ENSMUST00000083502 99 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm10704-201ENSMUST00000098952 730 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm13321-201ENSMUST00000117101 400 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm15766-201ENSMUST00000118025 813 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm12717-201ENSMUST00000118427 983 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm7312-201ENSMUST00000118798 469 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm11742-201ENSMUST00000119903 233 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm12332-201ENSMUST00000121397 922 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm16254-201ENSMUST00000131528 730 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm23534-201ENSMUST00000157539 97 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm15143-201ENSMUST00000178180 714 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm21241-201ENSMUST00000179551 934 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm20819-201ENSMUST00000191091 925 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm20871-201ENSMUST00000191322 931 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm37000-201ENSMUST00000193058 428 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm9632-201ENSMUST00000195934 643 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm42663-201ENSMUST00000199883 351 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm6261-201ENSMUST00000204707 760 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Mir134-201ENSMUST00000083492 71 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm42534-201ENSMUST00000196063 1754 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.77□□□□□ -1.65
Msh4Q99MT2 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Msh4Q99MT2 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 155.2 ms