Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm28500-201ENSMUST00000190286 151 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm37632-201ENSMUST00000191811 1142 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm18150-201ENSMUST00000195341 645 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm17775-201ENSMUST00000198542 258 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm46998-201ENSMUST00000221444 330 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 CT025552.2-201ENSMUST00000225497 317 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm23928-201ENSMUST00000082469 145 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 n-R5s173-201ENSMUST00000082620 119 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm22899-201ENSMUST00000104540 131 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm15377-201ENSMUST00000119594 246 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm25383-201ENSMUST00000157810 144 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm22536-201ENSMUST00000158171 134 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm24224-201ENSMUST00000158828 258 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm17155-201ENSMUST00000165969 473 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm6650-201ENSMUST00000166710 614 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm27883-201ENSMUST00000183941 102 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm27286-201ENSMUST00000184934 179 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm28614-201ENSMUST00000186483 458 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm44003-201ENSMUST00000203024 490 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm44604-201ENSMUST00000205475 496 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm6988-201ENSMUST00000222676 375 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm22423-201ENSMUST00000082861 184 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 n-R5s160-201ENSMUST00000083096 120 ntBASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Nup35Q8R4R6 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Mir147-201ENSMUST00000102354 79 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm24578-201ENSMUST00000103970 129 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm22778-201ENSMUST00000104090 128 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm14365-201ENSMUST00000117535 587 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm12467-201ENSMUST00000117625 745 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm8757-201ENSMUST00000119660 372 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm25966-201ENSMUST00000157169 117 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm26320-201ENSMUST00000157742 306 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm25906-201ENSMUST00000158489 126 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm3191-201ENSMUST00000167139 346 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm7335-201ENSMUST00000172475 373 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm22177-201ENSMUST00000175002 158 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 V1rg10-201ENSMUST00000183378 937 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.29□□□□□ -1.88
Nup35Q8R4R6 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm29281-201ENSMUST00000188077 381 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm3496-201ENSMUST00000188283 745 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm37996-201ENSMUST00000191859 367 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm9238-201ENSMUST00000196181 329 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm2607-201ENSMUST00000212389 627 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 Gm45710-201ENSMUST00000212847 215 ntBASIC3.29□□□□□ -1.88
Nup35Q8R4R6 CT030030.1-201ENSMUST00000218809 152 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms