Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Ccdc28bQ8CEG5 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 AC140299.2-201ENSMUST00000219546 1969 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm26387-201ENSMUST00000104238 132 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm22953-201ENSMUST00000116724 101 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm22709-201ENSMUST00000116893 111 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm15058-201ENSMUST00000117689 458 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm12231-201ENSMUST00000119447 695 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm15194-201ENSMUST00000120453 434 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm24751-201ENSMUST00000157844 102 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm16147-201ENSMUST00000162143 373 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Mir3097-201ENSMUST00000175356 67 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm27044-201ENSMUST00000183033 796 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm37996-201ENSMUST00000191859 367 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Ighv1-3-201ENSMUST00000192764 302 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm36638-201ENSMUST00000193295 400 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm43730-201ENSMUST00000199863 372 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 AC123835.1-201ENSMUST00000214362 670 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 CT030662.3-201ENSMUST00000228751 476 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm25800-201ENSMUST00000082636 134 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ccdc28bQ8CEG5 Gm24230-201ENSMUST00000104313 129 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm13607-201ENSMUST00000117875 539 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm15553-201ENSMUST00000118757 430 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm13737-201ENSMUST00000119793 232 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm11481-201ENSMUST00000120069 255 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm25103-201ENSMUST00000122671 318 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm26028-201ENSMUST00000158660 294 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm3008-201ENSMUST00000160566 571 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm27427-201ENSMUST00000185134 193 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm28920-201ENSMUST00000189957 699 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm38214-201ENSMUST00000192581 988 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm28724-202ENSMUST00000194218 295 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm36939-201ENSMUST00000194889 439 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm37993-201ENSMUST00000195301 988 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm44817-201ENSMUST00000205416 453 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm18258-201ENSMUST00000210413 542 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm18442-201ENSMUST00000220925 639 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ccdc28bQ8CEG5 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms