Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Gm24454-201ENSMUST00000083349 132 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm13245-201ENSMUST00000119646 260 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm12936-201ENSMUST00000121439 301 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm7931-201ENSMUST00000121537 271 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm25826-201ENSMUST00000157090 137 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm22428-201ENSMUST00000158554 132 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm28527-201ENSMUST00000185210 297 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm37682-201ENSMUST00000191776 522 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm37492-201ENSMUST00000191948 376 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm18382-201ENSMUST00000194394 582 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm43849-201ENSMUST00000201086 215 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm45146-201ENSMUST00000207108 221 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 AC099578.1-201ENSMUST00000220147 435 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 AC154511.1-201ENSMUST00000222578 1587 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm22293-201ENSMUST00000083314 109 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC5.1□□□□□ -1.59
Rnf220Q6PDX6 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm23691-201ENSMUST00000101878 107 ntBASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Mir465c-2-201ENSMUST00000104757 81 ntBASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm12891-201ENSMUST00000119358 240 ntBASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm15970-201ENSMUST00000160623 834 ntBASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm27820-201ENSMUST00000183628 175 ntBASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm21877-201ENSMUST00000185640 694 ntBASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm35648-201ENSMUST00000202304 475 ntBASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm7380-201ENSMUST00000211599 466 ntBASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 AC093926.1-201ENSMUST00000213730 243 ntBASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 AC192334.2-201ENSMUST00000223087 1091 ntBASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm2645-201ENSMUST00000223516 547 ntBASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 AC154747.1-201ENSMUST00000225265 239 ntBASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 AC109172.2-201ENSMUST00000228792 381 ntBASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Rnf220Q6PDX6 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms