Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm14909-201ENSMUST00000117853 351 ntBASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm24768-201ENSMUST00000158512 94 ntBASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm18150-201ENSMUST00000195341 645 ntBASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm44779-201ENSMUST00000206937 708 ntBASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm19709-201ENSMUST00000215403 482 ntBASIC5.23□□□□□ -1.57
Usp49Q6P9L4 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm8288-201ENSMUST00000223406 593 ntBASIC5.23□□□□□ -1.57
Usp49Q6P9L4 AC140210.1-201ENSMUST00000224961 534 ntBASIC5.23□□□□□ -1.57
Usp49Q6P9L4 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.23□□□□□ -1.57
Usp49Q6P9L4 AC116395.1-201ENSMUST00000225480 1143 ntBASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm22350-201ENSMUST00000083924 156 ntBASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Usp49Q6P9L4 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Gm15493-201ENSMUST00000119461 528 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Gm14784-201ENSMUST00000121604 663 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Gm26424-201ENSMUST00000122530 104 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Gm26347-201ENSMUST00000157526 131 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Gm37193-201ENSMUST00000193087 513 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Gm37636-201ENSMUST00000193583 359 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Gm43350-201ENSMUST00000196382 711 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 AC132918.1-201ENSMUST00000227877 925 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Gm24144-201ENSMUST00000082632 111 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Gm22220-201ENSMUST00000082671 149 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 n-R5s86-201ENSMUST00000083215 119 ntBASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Usp49Q6P9L4 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.21□□□□□ -1.57
Usp49Q6P9L4 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.21□□□□□ -1.57
Usp49Q6P9L4 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
Usp49Q6P9L4 Gm43178-201ENSMUST00000197257 1386 ntBASIC5.21□□□□□ -1.58
Usp49Q6P9L4 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Usp49Q6P9L4 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.21□□□□□ -1.58
Usp49Q6P9L4 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.21□□□□□ -1.58
Usp49Q6P9L4 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Usp49Q6P9L4 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.21□□□□□ -1.58
Usp49Q6P9L4 Gm24241-201ENSMUST00000157787 145 ntBASIC5.21□□□□□ -1.58
Usp49Q6P9L4 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC5.21□□□□□ -1.58
Usp49Q6P9L4 Gm22857-201ENSMUST00000174969 134 ntBASIC5.21□□□□□ -1.58
Usp49Q6P9L4 Gm25525-201ENSMUST00000177701 107 ntBASIC5.21□□□□□ -1.58
Usp49Q6P9L4 Gm26178-201ENSMUST00000177706 107 ntBASIC5.21□□□□□ -1.58
Usp49Q6P9L4 Gm26465-201ENSMUST00000178517 107 ntBASIC5.21□□□□□ -1.58
Usp49Q6P9L4 Gm24317-201ENSMUST00000178536 107 ntBASIC5.21□□□□□ -1.58
Usp49Q6P9L4 Gm16378-201ENSMUST00000179168 342 ntBASIC5.21□□□□□ -1.58
Usp49Q6P9L4 Gm25021-201ENSMUST00000179184 107 ntBASIC5.21□□□□□ -1.58
Usp49Q6P9L4 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Usp49Q6P9L4 Gm22995-201ENSMUST00000179670 107 ntBASIC5.21□□□□□ -1.58
Usp49Q6P9L4 Gm24424-201ENSMUST00000179714 107 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms