Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Gm29293-201ENSMUST00000189416 2188 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 AC022682.2-202ENSMUST00000224394 3943 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm44667-201ENSMUST00000207632 3337 ntBASIC10.48□□□□□ -0.73
Trim41Q5NCC3 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm38451-201ENSMUST00000208329 2646 ntBASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm37142-201ENSMUST00000193718 3110 ntBASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm5844-201ENSMUST00000119417 2191 ntBASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm26078-201ENSMUST00000104067 128 ntBASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm14364-201ENSMUST00000129209 267 ntBASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm24818-201ENSMUST00000175093 161 ntBASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm9332-201ENSMUST00000198431 730 ntBASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm42475-201ENSMUST00000201212 295 ntBASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm20786-201ENSMUST00000212649 436 ntBASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm8412-201ENSMUST00000077493 440 ntBASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm3608-201ENSMUST00000086725 2858 ntBASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC10.48□□□□□ -0.73
Trim41Q5NCC3 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Gm21051-201ENSMUST00000221757 1688 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Gm43788-201ENSMUST00000201539 2417 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Gm12235-201ENSMUST00000118596 170 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Gm23118-201ENSMUST00000122657 187 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Gm23553-201ENSMUST00000157817 295 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Gm17121-201ENSMUST00000170414 847 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Gm24407-201ENSMUST00000177864 141 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Gm17222-201ENSMUST00000180135 847 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Gm38015-201ENSMUST00000193048 188 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Gm44316-201ENSMUST00000199274 97 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Gm19900-201ENSMUST00000207285 576 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Gm6012-201ENSMUST00000210821 730 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Gm42607-201ENSMUST00000200221 3393 ntBASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim41Q5NCC3 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC10.46□□□□□ -0.73
Trim41Q5NCC3 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trim41Q5NCC3 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trim41Q5NCC3 AC131667.1-201ENSMUST00000214665 2175 ntBASIC10.46□□□□□ -0.73
Trim41Q5NCC3 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC10.46□□□□□ -0.73
Trim41Q5NCC3 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Trim41Q5NCC3 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trim41Q5NCC3 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trim41Q5NCC3 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim41Q5NCC3 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC10.46□□□□□ -0.73
Trim41Q5NCC3 Gm14128-201ENSMUST00000119514 1011 ntBASIC10.46□□□□□ -0.73
Trim41Q5NCC3 Gm17538-201ENSMUST00000168236 327 ntBASIC10.46□□□□□ -0.73
Trim41Q5NCC3 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
Trim41Q5NCC3 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC10.46□□□□□ -0.73
Trim41Q5NCC3 Gm2053-201ENSMUST00000195671 631 ntBASIC10.46□□□□□ -0.73
Trim41Q5NCC3 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms