Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm22739-201ENSMUST00000083437 160 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 AC154323.3-201ENSMUST00000226927 1660 ntBASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 Gm26696-201ENSMUST00000181941 2848 ntBASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 Gm43844-201ENSMUST00000202926 5605 ntBASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 Gm37001-201ENSMUST00000193377 190 ntBASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 Gm37791-201ENSMUST00000195081 286 ntBASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 Gm17954-201ENSMUST00000195893 607 ntBASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 Gm8288-201ENSMUST00000223406 593 ntBASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 CU024892.1-201ENSMUST00000224869 515 ntBASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 AC126275.2-201ENSMUST00000225224 253 ntBASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc88bQ4QRL3 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc88bQ4QRL3 Gm4736-201ENSMUST00000100870 380 ntBASIC6.71□□□□□ -1.34
Ccdc88bQ4QRL3 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc88bQ4QRL3 Gm11212-201ENSMUST00000118337 618 ntBASIC6.71□□□□□ -1.34
Ccdc88bQ4QRL3 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC6.71□□□□□ -1.34
Ccdc88bQ4QRL3 Gm25438-201ENSMUST00000158281 110 ntBASIC6.71□□□□□ -1.34
Ccdc88bQ4QRL3 Gm29408-201ENSMUST00000187536 216 ntBASIC6.71□□□□□ -1.34
Ccdc88bQ4QRL3 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC6.71□□□□□ -1.34
Ccdc88bQ4QRL3 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Ccdc88bQ4QRL3 Gm43594-201ENSMUST00000201153 3442 ntBASIC6.71□□□□□ -1.34
Ccdc88bQ4QRL3 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc88bQ4QRL3 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc88bQ4QRL3 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc88bQ4QRL3 Gm42680-201ENSMUST00000196238 2500 ntBASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Gm24831-201ENSMUST00000116778 126 ntBASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Gm6900-201ENSMUST00000178971 342 ntBASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Gm8745-201ENSMUST00000207846 782 ntBASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Gm23443-201ENSMUST00000082916 128 ntBASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Gm7381-201ENSMUST00000098958 300 ntBASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc88bQ4QRL3 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Gm25765-201ENSMUST00000104100 132 ntBASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Gm23365-201ENSMUST00000175019 125 ntBASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Gm25960-201ENSMUST00000175110 125 ntBASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Gm44453-201ENSMUST00000175161 126 ntBASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Gm25195-201ENSMUST00000177656 126 ntBASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Gm36964-201ENSMUST00000191876 198 ntBASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Gm42478-201ENSMUST00000199252 1467 ntBASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc88bQ4QRL3 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 Gm24318-201ENSMUST00000104490 131 ntBASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 Gm5060-201ENSMUST00000120072 599 ntBASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 Gm37081-201ENSMUST00000192034 196 ntBASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 Gm45093-201ENSMUST00000206859 2463 ntBASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 Fus-202ENSMUST00000079045 2623 ntBASIC6.68□□□□□ -1.34
Ccdc88bQ4QRL3 Mup-ps20-201ENSMUST00000121132 389 ntBASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Gm25535-201ENSMUST00000175364 125 ntBASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Gm27254-201ENSMUST00000183926 517 ntBASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Mir6917-201ENSMUST00000184111 61 ntBASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Mir7050-201ENSMUST00000184636 60 ntBASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Gm18429-201ENSMUST00000198707 421 ntBASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Gm42983-201ENSMUST00000199879 815 ntBASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms