Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm14933-201ENSMUST00000118840 481 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm23902-201ENSMUST00000157571 134 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm28614-201ENSMUST00000186483 458 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm8861-201ENSMUST00000196346 832 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Trdv3-201ENSMUST00000198551 309 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm42990-201ENSMUST00000199231 312 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm29815-201ENSMUST00000202418 178 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm45499-201ENSMUST00000211656 280 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm9616-201ENSMUST00000221154 781 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 AC134254.4-201ENSMUST00000223086 370 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm23058-201ENSMUST00000093703 107 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm22473-201ENSMUST00000104114 132 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm26143-201ENSMUST00000104480 108 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm14688-201ENSMUST00000119169 303 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm12852-201ENSMUST00000119478 719 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm12884-201ENSMUST00000120371 325 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm4487-201ENSMUST00000150617 442 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm25913-201ENSMUST00000157617 135 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm24898-201ENSMUST00000158133 106 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm29148-201ENSMUST00000188140 336 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm5252-201ENSMUST00000189030 909 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm38166-201ENSMUST00000191660 471 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm6057-201ENSMUST00000195927 314 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm18193-201ENSMUST00000210017 772 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm7117-201ENSMUST00000071515 387 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trafd1Q3UDK1 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm24608-201ENSMUST00000104381 136 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm26019-201ENSMUST00000104407 119 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm13550-201ENSMUST00000118185 525 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm14067-201ENSMUST00000119340 314 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm5060-201ENSMUST00000120072 599 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm15141-201ENSMUST00000121860 729 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm8200-201ENSMUST00000122390 222 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 107.1 ms