Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm17775-201ENSMUST00000198542 258 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm44060-201ENSMUST00000204440 410 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm18791-201ENSMUST00000204611 726 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm44818-201ENSMUST00000206608 358 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC4.92□□□□□ -1.62
Col8a1Q00780 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 AC113269.1-201ENSMUST00000227185 674 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 AC116319.2-201ENSMUST00000228159 984 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
Col8a1Q00780 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm23514-201ENSMUST00000082827 130 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm25793-201ENSMUST00000083287 107 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm42531-201ENSMUST00000201648 4048 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm37951-201ENSMUST00000192963 3032 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Col8a1Q00780 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Col8a1Q00780 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Col8a1Q00780 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 AC164297.2-201ENSMUST00000224388 1508 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm38190-201ENSMUST00000192350 4755 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm37079-201ENSMUST00000194114 2135 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC4.91□□□□□ -1.62
Col8a1Q00780 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
Col8a1Q00780 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Col8a1Q00780 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm13503-201ENSMUST00000119017 446 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm12189-201ENSMUST00000119779 912 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm14159-201ENSMUST00000119832 451 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm11759-201ENSMUST00000121742 464 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm26349-201ENSMUST00000157530 130 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm23513-201ENSMUST00000158181 133 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm23068-201ENSMUST00000158239 293 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm25163-201ENSMUST00000158905 104 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC4.91□□□□□ -1.62
Col8a1Q00780 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC4.91□□□□□ -1.62
Col8a1Q00780 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm2053-201ENSMUST00000195671 631 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm43467-201ENSMUST00000197441 437 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm45660-201ENSMUST00000210267 151 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.91□□□□□ -1.62
Col8a1Q00780 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC4.91□□□□□ -1.62
Col8a1Q00780 AC159297.1-201ENSMUST00000218689 290 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm24144-201ENSMUST00000082632 111 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm37186-201ENSMUST00000195629 2861 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm44209-201ENSMUST00000204556 4153 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
Col8a1Q00780 Gm43921-201ENSMUST00000204296 1792 ntBASIC4.91□□□□□ -1.62
Col8a1Q00780 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col8a1Q00780 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col8a1Q00780 Gm45179-201ENSMUST00000208452 4337 ntBASIC4.9□□□□□ -1.62
Col8a1Q00780 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Col8a1Q00780 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col8a1Q00780 AC105407.2-201ENSMUST00000223707 3911 ntBASIC4.9□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms