Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 AC170999.2-201ENSMUST00000226223 264 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
Rfx1P48377 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx1P48377 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Gm6215-201ENSMUST00000119297 1386 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx1P48377 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Gm42662-201ENSMUST00000202539 1431 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx1P48377 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx1P48377 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Rfx1P48377 Gm38065-201ENSMUST00000193147 3492 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Rfx1P48377 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx1P48377 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Rfx1P48377 Gm44751-201ENSMUST00000208302 4387 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC6.64□□□□□ -1.35
Rfx1P48377 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx1P48377 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx1P48377 Gm38212-201ENSMUST00000194081 2756 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx1P48377 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm23691-201ENSMUST00000101878 107 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm23839-201ENSMUST00000116957 109 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm12939-201ENSMUST00000117303 165 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm6427-201ENSMUST00000118721 979 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm12543-201ENSMUST00000120410 543 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm11829-201ENSMUST00000121003 282 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm24836-201ENSMUST00000122609 108 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm25291-201ENSMUST00000122795 144 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm23233-201ENSMUST00000157301 137 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx1P48377 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Rfx1P48377 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm20530-201ENSMUST00000174261 254 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm21737-201ENSMUST00000178112 664 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm20874-201ENSMUST00000178356 663 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm21744-201ENSMUST00000178403 662 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm20901-201ENSMUST00000180177 664 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm27676-201ENSMUST00000183669 61 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Mir6951-201ENSMUST00000183910 75 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm28740-201ENSMUST00000186142 215 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm28090-201ENSMUST00000189458 664 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm21647-201ENSMUST00000189755 664 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm38098-201ENSMUST00000194115 241 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC6.63□□□□□ -1.35
Rfx1P48377 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm42702-201ENSMUST00000199515 4217 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm43505-201ENSMUST00000200579 139 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm42961-201ENSMUST00000202023 181 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm18913-201ENSMUST00000204311 1789 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm45146-201ENSMUST00000207108 221 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm44625-201ENSMUST00000207838 1561 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.63□□□□□ -1.35
Rfx1P48377 CT025665.1-201ENSMUST00000215251 1199 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm7802-201ENSMUST00000216464 262 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx1P48377 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Rfx1P48377 Mir181a-1-201ENSMUST00000083631 87 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 Gm24446-201ENSMUST00000083982 156 ntBASIC6.63□□□□□ -1.35
Rfx1P48377 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx1P48377 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Rfx1P48377 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx1P48377 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx1P48377 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx1P48377 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx1P48377 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Rfx1P48377 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx1P48377 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx1P48377 Gm12633-201ENSMUST00000117742 1705 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx1P48377 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx1P48377 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Rfx1P48377 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx1P48377 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC6.62□□□□□ -1.35
Rfx1P48377 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx1P48377 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx1P48377 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Rfx1P48377 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Rfx1P48377 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC6.62□□□□□ -1.35
Rfx1P48377 Gm12878-201ENSMUST00000118744 332 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms