Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm26045-201ENSMUST00000157862 97 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Gm24854-201ENSMUST00000158025 98 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Mir1264-201ENSMUST00000175381 86 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Gm27551-201ENSMUST00000184258 77 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Mir6943-201ENSMUST00000185186 66 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lire1P11260 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lire1P11260 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lire1P11260 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.69□□□□□ -1.66
Lire1P11260 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lire1P11260 Gm5731-201ENSMUST00000190969 481 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Gm38150-201ENSMUST00000192996 452 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC4.69□□□□□ -1.66
Lire1P11260 Gm43408-201ENSMUST00000198263 440 ntBASIC4.69□□□□□ -1.66
Lire1P11260 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lire1P11260 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lire1P11260 Gm45236-201ENSMUST00000208632 229 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Gm9375-201ENSMUST00000208899 903 ntBASIC4.69□□□□□ -1.66
Lire1P11260 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.69□□□□□ -1.66
Lire1P11260 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Gm6171-201ENSMUST00000220760 645 ntBASIC4.69□□□□□ -1.66
Lire1P11260 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.69□□□□□ -1.66
Lire1P11260 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lire1P11260 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.69□□□□□ -1.66
Lire1P11260 AC165260.4-201ENSMUST00000225924 724 ntBASIC4.69□□□□□ -1.66
Lire1P11260 AC140393.2-201ENSMUST00000226894 943 ntBASIC4.69□□□□□ -1.66
Lire1P11260 AC102291.1-201ENSMUST00000227164 529 ntBASIC4.69□□□□□ -1.66
Lire1P11260 AC154436.2-201ENSMUST00000227408 208 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Gm23626-201ENSMUST00000082458 133 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Gm23508-201ENSMUST00000083079 72 ntBASIC4.69□□□□□ -1.66
Lire1P11260 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Lire1P11260 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.69□□□□□ -1.66
Lire1P11260 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Lire1P11260 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Lire1P11260 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.69□□□□□ -1.66
Lire1P11260 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.69□□□□□ -1.66
Lire1P11260 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Lire1P11260 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Lire1P11260 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Lire1P11260 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Lire1P11260 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.68□□□□□ -1.66
Lire1P11260 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Lire1P11260 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Lire1P11260 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
Lire1P11260 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Lire1P11260 Gm10552-201ENSMUST00000113396 372 ntBASIC4.68□□□□□ -1.66
Lire1P11260 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Lire1P11260 Gm14142-201ENSMUST00000117833 296 ntBASIC4.68□□□□□ -1.66
Lire1P11260 Gm11346-201ENSMUST00000118346 704 ntBASIC4.68□□□□□ -1.66
Lire1P11260 Gm15772-201ENSMUST00000118533 438 ntBASIC4.68□□□□□ -1.66
Lire1P11260 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
Lire1P11260 Gm5392-201ENSMUST00000122189 789 ntBASIC4.68□□□□□ -1.66
Lire1P11260 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Lire1P11260 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Lire1P11260 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Lire1P11260 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.68□□□□□ -1.66
Lire1P11260 Gm9499-201ENSMUST00000180888 964 ntBASIC4.68□□□□□ -1.66
Lire1P11260 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.68□□□□□ -1.66
Lire1P11260 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.68□□□□□ -1.66
Lire1P11260 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Lire1P11260 Gm20954-201ENSMUST00000189078 644 ntBASIC4.68□□□□□ -1.66
Lire1P11260 Gm38098-201ENSMUST00000194115 241 ntBASIC4.68□□□□□ -1.66
Lire1P11260 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.68□□□□□ -1.66
Lire1P11260 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.68□□□□□ -1.66
Lire1P11260 Gm44389-201ENSMUST00000203795 182 ntBASIC4.68□□□□□ -1.66
Lire1P11260 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Lire1P11260 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.68□□□□□ -1.66
Lire1P11260 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.68□□□□□ -1.66
Lire1P11260 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.68□□□□□ -1.66
Lire1P11260 Snord14e-201ENSMUST00000082857 90 ntBASIC4.68□□□□□ -1.66
Lire1P11260 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
Lire1P11260 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Lire1P11260 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Lire1P11260 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Lire1P11260 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Lire1P11260 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Lire1P11260 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Lire1P11260 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Lire1P11260 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Lire1P11260 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Lire1P11260 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Lire1P11260 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Lire1P11260 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Lire1P11260 Gm7206-201ENSMUST00000117730 508 ntBASIC4.67□□□□□ -1.66
Lire1P11260 Gm3267-201ENSMUST00000118671 473 ntBASIC4.67□□□□□ -1.66
Lire1P11260 Gm13064-201ENSMUST00000119125 557 ntBASIC4.67□□□□□ -1.66
Lire1P11260 Gm14046-201ENSMUST00000119389 509 ntBASIC4.67□□□□□ -1.66
Lire1P11260 Gm14577-201ENSMUST00000121134 256 ntBASIC4.67□□□□□ -1.66
Lire1P11260 Gm15075-201ENSMUST00000122187 477 ntBASIC4.67□□□□□ -1.66
Lire1P11260 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.67□□□□□ -1.66
Lire1P11260 Gm24666-201ENSMUST00000158937 167 ntBASIC4.67□□□□□ -1.66
Lire1P11260 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.67□□□□□ -1.66
Lire1P11260 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.67□□□□□ -1.66
Lire1P11260 Gm44703-201ENSMUST00000205724 248 ntBASIC4.67□□□□□ -1.66
Lire1P11260 Gm44820-201ENSMUST00000207420 396 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms