Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm2229-201ENSMUST00000193328 710 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Ighv1-40-201ENSMUST00000194231 345 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm6520-201ENSMUST00000200636 410 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm19177-201ENSMUST00000204520 613 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm9240-201ENSMUST00000206527 742 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm45209-201ENSMUST00000207122 353 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm19196-201ENSMUST00000209258 357 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm7986-201ENSMUST00000221336 551 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 AC112935.1-201ENSMUST00000227603 250 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 AC158142.2-201ENSMUST00000227892 635 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm10092-201ENSMUST00000077110 180 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm22829-201ENSMUST00000083771 106 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm37064-201ENSMUST00000193851 2231 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 AC154642.2-201ENSMUST00000223657 2485 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm5084-202ENSMUST00000224064 3609 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm38026-201ENSMUST00000193284 3880 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 AC153143.2-201ENSMUST00000220999 1804 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm37216-201ENSMUST00000193817 3478 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hoxd3P09027 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Hoxd3P09027 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hoxd3P09027 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hoxd3P09027 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.15□□□□□ -1.58
Hoxd3P09027 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Hoxd3P09027 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hoxd3P09027 Gm43606-201ENSMUST00000195938 3556 ntBASIC5.15□□□□□ -1.58
Hoxd3P09027 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Hoxd3P09027 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
Hoxd3P09027 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hoxd3P09027 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hoxd3P09027 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Hoxd3P09027 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hoxd3P09027 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Hoxd3P09027 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.15□□□□□ -1.58
Hoxd3P09027 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
Hoxd3P09027 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Hoxd3P09027 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Hoxd3P09027 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.58
Hoxd3P09027 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
Hoxd3P09027 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm14915-201ENSMUST00000120747 204 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm14559-201ENSMUST00000121745 496 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm22718-201ENSMUST00000122701 315 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC5.15□□□□□ -1.59
Hoxd3P09027 Mir1953-201ENSMUST00000157866 89 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm23276-201ENSMUST00000157913 138 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm23262-201ENSMUST00000158323 168 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm3027-201ENSMUST00000167579 451 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm3104-201ENSMUST00000171004 473 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC5.15□□□□□ -1.59
Hoxd3P09027 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm24518-201ENSMUST00000180275 94 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 AC122844.1-201ENSMUST00000195971 107 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Igkv2-105-201ENSMUST00000196931 377 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm44481-201ENSMUST00000197288 84 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm23011-202ENSMUST00000197855 275 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm44374-201ENSMUST00000199821 140 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm36448-201ENSMUST00000199916 438 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm44339-201ENSMUST00000200598 84 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 BC049739-201ENSMUST00000202626 660 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm17908-201ENSMUST00000205552 1256 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm18306-201ENSMUST00000207338 569 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm45879-201ENSMUST00000212521 392 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm4556-201ENSMUST00000217808 355 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
Hoxd3P09027 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm23055-201ENSMUST00000082805 94 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Hoxd3P09027 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms