Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm3489-201ENSMUST00000190083 528 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 Gm19774-201ENSMUST00000190667 114 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col3a1P08121 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC5.1□□□□□ -1.59
Col3a1P08121 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col3a1P08121 Gm43344-201ENSMUST00000198723 1229 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col3a1P08121 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC5.1□□□□□ -1.59
Col3a1P08121 Gm44583-201ENSMUST00000207478 281 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 AC140344.1-201ENSMUST00000223384 387 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 CT025523.1-201ENSMUST00000228318 694 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Col3a1P08121 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Col3a1P08121 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Col3a1P08121 Mir202-201ENSMUST00000083568 72 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Col3a1P08121 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col3a1P08121 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col3a1P08121 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col3a1P08121 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col3a1P08121 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col3a1P08121 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col3a1P08121 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.09□□□□□ -1.59
Col3a1P08121 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col3a1P08121 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.09□□□□□ -1.59
Col3a1P08121 Gm10552-201ENSMUST00000113396 372 ntBASIC5.09□□□□□ -1.59
Col3a1P08121 Gm24590-201ENSMUST00000116699 119 ntBASIC5.09□□□□□ -1.59
Col3a1P08121 Gm24998-201ENSMUST00000157908 89 ntBASIC5.09□□□□□ -1.59
Col3a1P08121 Gm24503-201ENSMUST00000158454 135 ntBASIC5.09□□□□□ -1.59
Col3a1P08121 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col3a1P08121 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col3a1P08121 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC5.09□□□□□ -1.59
Col3a1P08121 Gm38154-201ENSMUST00000195444 340 ntBASIC5.09□□□□□ -1.59
Col3a1P08121 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC5.09□□□□□ -1.59
Col3a1P08121 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col3a1P08121 Gm5885-202ENSMUST00000203357 528 ntBASIC5.09□□□□□ -1.59
Col3a1P08121 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col3a1P08121 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col3a1P08121 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col3a1P08121 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col3a1P08121 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.09□□□□□ -1.59
Col3a1P08121 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col3a1P08121 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col3a1P08121 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC5.09□□□□□ -1.59
Col3a1P08121 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col3a1P08121 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Col3a1P08121 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
Col3a1P08121 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Col3a1P08121 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Col3a1P08121 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col3a1P08121 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col3a1P08121 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col3a1P08121 Gm6558-201ENSMUST00000191934 1973 ntBASIC5.08□□□□□ -1.6
Col3a1P08121 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
Col3a1P08121 Gm24935-201ENSMUST00000103770 110 ntBASIC5.08□□□□□ -1.6
Col3a1P08121 Gm24982-201ENSMUST00000104456 132 ntBASIC5.08□□□□□ -1.6
Col3a1P08121 Gm15553-201ENSMUST00000118757 430 ntBASIC5.08□□□□□ -1.6
Col3a1P08121 Gm15364-201ENSMUST00000119618 585 ntBASIC5.08□□□□□ -1.6
Col3a1P08121 Gm14905-201ENSMUST00000122351 639 ntBASIC5.08□□□□□ -1.6
Col3a1P08121 Gm22730-201ENSMUST00000158085 171 ntBASIC5.08□□□□□ -1.6
Col3a1P08121 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col3a1P08121 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col3a1P08121 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col3a1P08121 Mir6345-201ENSMUST00000184286 128 ntBASIC5.08□□□□□ -1.6
Col3a1P08121 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col3a1P08121 Gm45078-201ENSMUST00000205343 546 ntBASIC5.08□□□□□ -1.6
Col3a1P08121 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC5.08□□□□□ -1.6
Col3a1P08121 Gm18043-201ENSMUST00000216741 739 ntBASIC5.08□□□□□ -1.6
Col3a1P08121 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.08□□□□□ -1.6
Col3a1P08121 AC129202.3-201ENSMUST00000224413 733 ntBASIC5.08□□□□□ -1.6
Col3a1P08121 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.08□□□□□ -1.6
Col3a1P08121 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col3a1P08121 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col3a1P08121 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col3a1P08121 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col3a1P08121 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col3a1P08121 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col3a1P08121 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col3a1P08121 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col3a1P08121 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.08□□□□□ -1.6
Col3a1P08121 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col3a1P08121 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
Col3a1P08121 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Col3a1P08121 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.08□□□□□ -1.6
Col3a1P08121 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col3a1P08121 Gm23133-201ENSMUST00000104255 135 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm26143-201ENSMUST00000104480 108 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm12571-201ENSMUST00000118132 243 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm15022-201ENSMUST00000122074 746 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm15530-201ENSMUST00000122206 555 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC5.07□□□□□ -1.6
Col3a1P08121 Gm15279-201ENSMUST00000155593 288 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm16134-201ENSMUST00000161714 336 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm22120-201ENSMUST00000175590 70 ntBASIC5.07□□□□□ -1.6
Col3a1P08121 Gm20574-201ENSMUST00000182867 917 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms