Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Herc1E9PZP8 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC2.34□□□□□ -2.03
Herc1E9PZP8 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC2.34□□□□□ -2.03
Herc1E9PZP8 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Herc1E9PZP8 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
Herc1E9PZP8 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Herc1E9PZP8 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Herc1E9PZP8 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
Herc1E9PZP8 AC131687.1-201ENSMUST00000225931 5446 ntBASIC2.34□□□□□ -2.04
Herc1E9PZP8 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Herc1E9PZP8 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC2.34□□□□□ -2.04
Herc1E9PZP8 Gm43355-201ENSMUST00000196541 346 ntBASIC2.34□□□□□ -2.04
Herc1E9PZP8 Gm42578-201ENSMUST00000199960 194 ntBASIC2.34□□□□□ -2.04
Herc1E9PZP8 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.34□□□□□ -2.04
Herc1E9PZP8 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.34□□□□□ -2.04
Herc1E9PZP8 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Herc1E9PZP8 AC144772.3-201ENSMUST00000228829 3126 ntBASIC2.34□□□□□ -2.04
Herc1E9PZP8 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Herc1E9PZP8 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.04
Herc1E9PZP8 Gm42992-201ENSMUST00000197043 6836 ntBASIC2.34□□□□□ -2.04
Herc1E9PZP8 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Herc1E9PZP8 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Herc1E9PZP8 Gm43881-201ENSMUST00000203051 2530 ntBASIC2.34□□□□□ -2.04
Herc1E9PZP8 Gm11576-201ENSMUST00000117433 417 ntBASIC2.34□□□□□ -2.04
Herc1E9PZP8 Gm25369-201ENSMUST00000158848 132 ntBASIC2.34□□□□□ -2.04
Herc1E9PZP8 Gm5974-201ENSMUST00000181607 986 ntBASIC2.34□□□□□ -2.04
Herc1E9PZP8 AC154441.1-201ENSMUST00000223653 1006 ntBASIC2.34□□□□□ -2.04
Herc1E9PZP8 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Herc1E9PZP8 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Herc1E9PZP8 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Herc1E9PZP8 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Herc1E9PZP8 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Herc1E9PZP8 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
Herc1E9PZP8 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gm25377-201ENSMUST00000104334 129 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gm23602-201ENSMUST00000157258 132 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gm44820-201ENSMUST00000207420 396 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 n-R5s21-201ENSMUST00000122692 117 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 AC142499.1-201ENSMUST00000220036 374 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Ear-ps9-202ENSMUST00000226796 245 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gm2080-201ENSMUST00000211299 1573 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gm12719-201ENSMUST00000118859 241 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gm6214-201ENSMUST00000178845 541 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 AC163621.2-201ENSMUST00000222229 682 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 AC117949.2-201ENSMUST00000225900 584 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gm43260-201ENSMUST00000197378 2430 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
Herc1E9PZP8 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 AC125487.2-201ENSMUST00000219810 1300 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gm13873-201ENSMUST00000119208 427 ntBASIC2.33□□□□□ -2.04
Herc1E9PZP8 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Herc1E9PZP8 Igkv2-113-201ENSMUST00000196138 362 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 107.3 ms