Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm11488-201ENSMUST00000117277 863 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Clec2f-201ENSMUST00000121051 374 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm22380-201ENSMUST00000157479 95 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm23499-201ENSMUST00000157736 268 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm4540-201ENSMUST00000170669 429 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm27190-201ENSMUST00000184890 542 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm27392-201ENSMUST00000185041 101 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm37881-201ENSMUST00000193001 421 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm43649-201ENSMUST00000196596 391 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm9712-201ENSMUST00000210842 311 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm272-201ENSMUST00000222073 919 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm25134-201ENSMUST00000082646 160 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Col6a4A2AX52 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Col6a4A2AX52 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Col6a4A2AX52 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Col6a4A2AX52 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm22936-201ENSMUST00000103955 126 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm22115-201ENSMUST00000103976 133 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm23923-201ENSMUST00000104108 133 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm15553-201ENSMUST00000118757 430 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm12276-201ENSMUST00000121709 301 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm6214-201ENSMUST00000178845 541 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Col6a4A2AX52 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC3.42□□□□□ -1.86
Col6a4A2AX52 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC3.42□□□□□ -1.86
Col6a4A2AX52 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm14369-201ENSMUST00000121355 285 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm22480-201ENSMUST00000122568 128 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm37659-201ENSMUST00000194574 111 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm42694-201ENSMUST00000196951 358 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm19196-201ENSMUST00000209258 357 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm18903-201ENSMUST00000215343 480 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col6a4A2AX52 AC131677.1-201ENSMUST00000218721 535 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Gm12582-201ENSMUST00000030555 697 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Snord59a-201ENSMUST00000082844 74 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a4A2AX52 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a4A2AX52 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC3.42□□□□□ -1.86
Col6a4A2AX52 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col6a4A2AX52 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.41□□□□□ -1.86
Col6a4A2AX52 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col6a4A2AX52 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.41□□□□□ -1.86
Col6a4A2AX52 Gm26140-201ENSMUST00000103807 110 ntBASIC3.41□□□□□ -1.86
Col6a4A2AX52 Gm26019-201ENSMUST00000104407 119 ntBASIC3.41□□□□□ -1.86
Col6a4A2AX52 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Gm12245-201ENSMUST00000117266 357 ntBASIC3.41□□□□□ -1.86
Col6a4A2AX52 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Gm20657-201ENSMUST00000177079 515 ntBASIC3.41□□□□□ -1.86
Col6a4A2AX52 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a4A2AX52 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Gm7988-201ENSMUST00000196623 2297 ntBASIC3.41□□□□□ -1.86
Col6a4A2AX52 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col6a4A2AX52 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms