Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm36997-201ENSMUST00000195090 707 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm38008-201ENSMUST00000195333 518 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm43828-201ENSMUST00000196890 639 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm5288-201ENSMUST00000198323 1119 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm6051-201ENSMUST00000201529 352 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm29793-201ENSMUST00000202874 460 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm45007-201ENSMUST00000206237 366 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm44757-201ENSMUST00000206373 157 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm18258-201ENSMUST00000210413 542 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm39197-201ENSMUST00000212069 457 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm22005-201ENSMUST00000082795 141 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm13220-201ENSMUST00000121535 508 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm25278-201ENSMUST00000157267 120 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm24507-201ENSMUST00000157683 134 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm25456-201ENSMUST00000157952 109 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm25553-201ENSMUST00000158076 79 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm21856-201ENSMUST00000187547 696 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm21735-201ENSMUST00000190360 696 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm43765-201ENSMUST00000196303 893 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm44403-201ENSMUST00000198554 129 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm17811-201ENSMUST00000206193 387 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm22350-201ENSMUST00000083924 156 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm24917-201ENSMUST00000083935 104 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.22□□□□□ -1.73
Trim3Q9R1R2 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
Trim3Q9R1R2 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.21□□□□□ -1.73
Trim3Q9R1R2 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm22778-201ENSMUST00000104090 128 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm23709-201ENSMUST00000104364 130 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm11633-201ENSMUST00000118176 444 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm12988-201ENSMUST00000119054 478 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm11965-201ENSMUST00000122017 277 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 Gm37632-201ENSMUST00000191811 1142 ntBASIC4.21□□□□□ -1.74
Trim3Q9R1R2 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim3Q9R1R2 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms