Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm38330-201ENSMUST00000192743 959 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm31572-201ENSMUST00000193341 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm30175-201ENSMUST00000194173 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm37441-201ENSMUST00000194430 678 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm38107-201ENSMUST00000194873 696 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm30858-201ENSMUST00000195516 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm4501-201ENSMUST00000207330 551 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm4558-201ENSMUST00000207886 521 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm4528-201ENSMUST00000207905 551 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm18924-201ENSMUST00000211929 316 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Thoc7-209ENSMUST00000225325 765 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 AC154616.2-201ENSMUST00000227978 398 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm11894-201ENSMUST00000121579 328 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm15530-201ENSMUST00000122206 555 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm9613-201ENSMUST00000171662 196 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm20657-201ENSMUST00000177079 515 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm14527-201ENSMUST00000179300 639 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm38181-201ENSMUST00000181357 720 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm27024-201ENSMUST00000182561 755 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Mir6400-201ENSMUST00000184870 92 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Mir6715-201ENSMUST00000184990 57 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm43586-201ENSMUST00000195948 310 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm42619-201ENSMUST00000197564 1136 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm7726-201ENSMUST00000206241 231 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm29884-201ENSMUST00000218403 453 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 n-R5s46-201ENSMUST00000083960 116 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm3089-201ENSMUST00000200804 1395 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Gm3302-201ENSMUST00000201462 1395 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.01□□□□□ -1.77
Trem1Q9JKE2 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trem1Q9JKE2 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trem1Q9JKE2 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4□□□□□ -1.77
Trem1Q9JKE2 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Trem1Q9JKE2 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
Trem1Q9JKE2 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trem1Q9JKE2 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trem1Q9JKE2 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trem1Q9JKE2 Gm11912-201ENSMUST00000117235 264 ntBASIC4□□□□□ -1.77
Trem1Q9JKE2 Gm11821-201ENSMUST00000117335 979 ntBASIC4□□□□□ -1.77
Trem1Q9JKE2 Gm15001-201ENSMUST00000117657 795 ntBASIC4□□□□□ -1.77
Trem1Q9JKE2 Gm13607-201ENSMUST00000117875 539 ntBASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms