Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm9616-201ENSMUST00000221154 781 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm7093-201ENSMUST00000223004 581 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 AC096628.1-201ENSMUST00000226060 641 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm26019-201ENSMUST00000104407 119 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm14878-201ENSMUST00000118167 293 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm15333-201ENSMUST00000118825 364 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm13333-201ENSMUST00000119424 781 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm25456-201ENSMUST00000157952 109 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm15796-201ENSMUST00000162135 204 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm27883-201ENSMUST00000183941 102 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm29031-201ENSMUST00000185316 614 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm29000-201ENSMUST00000185444 614 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm28204-201ENSMUST00000185934 614 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm28290-201ENSMUST00000186505 614 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm28161-201ENSMUST00000186669 614 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm28749-209ENSMUST00000189599 614 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm37050-201ENSMUST00000193464 466 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm33163-201ENSMUST00000194504 614 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm6051-201ENSMUST00000201529 352 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm44002-201ENSMUST00000205134 594 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm44607-201ENSMUST00000205611 1090 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm44757-201ENSMUST00000206373 157 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm33626-201ENSMUST00000206790 828 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm44845-201ENSMUST00000208773 335 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 CT030030.1-201ENSMUST00000218809 152 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm26449-201ENSMUST00000082452 104 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Mir134-201ENSMUST00000083492 71 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Lima1Q9ERG0 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.13□□□□□ -1.75
Lima1Q9ERG0 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gm3077-201ENSMUST00000165903 627 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gm18128-201ENSMUST00000172625 511 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gm26238-201ENSMUST00000175538 117 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gm8604-201ENSMUST00000183150 965 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gm29563-201ENSMUST00000187249 496 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Trbv11-201ENSMUST00000194354 260 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gm8774-201ENSMUST00000203621 692 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gm5876-201ENSMUST00000203735 243 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gm45031-201ENSMUST00000206800 288 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Lima1Q9ERG0 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 AC121804.1-201ENSMUST00000221016 394 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Lima1Q9ERG0 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Lima1Q9ERG0 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 109.5 ms