Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.11□□□□□ -1.75
Cdc40Q9DC48 CT009765.2-201ENSMUST00000221331 392 ntBASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Gm7093-201ENSMUST00000223004 581 ntBASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cdc40Q9DC48 AC154838.2-201ENSMUST00000226602 747 ntBASIC4.11□□□□□ -1.75
Cdc40Q9DC48 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Gm6195-201ENSMUST00000063059 357 ntBASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Gm18422-202ENSMUST00000203798 2214 ntBASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Cdc40Q9DC48 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm14861-201ENSMUST00000119451 455 ntBASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Llph-ps1-201ENSMUST00000121281 390 ntBASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm2182-201ENSMUST00000145243 663 ntBASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm26373-201ENSMUST00000157833 103 ntBASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm24636-201ENSMUST00000158673 288 ntBASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm16545-201ENSMUST00000161968 463 ntBASIC4.1□□□□□ -1.75
Cdc40Q9DC48 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm22243-201ENSMUST00000178754 120 ntBASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm6214-201ENSMUST00000178845 541 ntBASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm27457-201ENSMUST00000184771 156 ntBASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm28615-201ENSMUST00000187527 482 ntBASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm45392-201ENSMUST00000210441 214 ntBASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm45359-201ENSMUST00000210635 427 ntBASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 AC154562.1-201ENSMUST00000226140 966 ntBASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Cdc40Q9DC48 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Gm12571-201ENSMUST00000118132 243 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Gm12994-201ENSMUST00000119601 447 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Gm21816-201ENSMUST00000179255 360 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Gm29196-201ENSMUST00000189239 618 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Mir142-201ENSMUST00000198092 64 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Gm45498-201ENSMUST00000210346 283 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Gm45434-201ENSMUST00000210550 293 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Gm17779-201ENSMUST00000213395 394 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Gm19181-201ENSMUST00000218891 940 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Mir504-201ENSMUST00000093602 79 ntBASIC4.09□□□□□ -1.75
Cdc40Q9DC48 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 128.7 ms