Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm8200-201ENSMUST00000122390 222 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm25806-201ENSMUST00000122782 122 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm22158-201ENSMUST00000158411 126 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm7281-201ENSMUST00000160010 543 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm16558-201ENSMUST00000163015 532 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm25037-201ENSMUST00000175418 110 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm8939-201ENSMUST00000192577 964 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm37088-201ENSMUST00000193887 406 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm43044-201ENSMUST00000198091 379 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm44543-201ENSMUST00000209136 396 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm6195-201ENSMUST00000063059 357 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Mir383-201ENSMUST00000083523 70 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm44624-201ENSMUST00000208700 2278 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.43□□□□□ -1.7
Chmp2aQ9DB34 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm14365-201ENSMUST00000117535 587 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm12638-201ENSMUST00000119531 298 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm12379-201ENSMUST00000119607 391 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm11398-201ENSMUST00000120330 320 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm5379-201ENSMUST00000120973 826 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm26352-201ENSMUST00000158223 125 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm25605-201ENSMUST00000158364 124 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm17109-201ENSMUST00000163985 358 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm20701-201ENSMUST00000176082 347 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm27611-201ENSMUST00000184690 108 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm37241-201ENSMUST00000191736 523 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm9238-201ENSMUST00000196181 329 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm45434-201ENSMUST00000210550 293 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm9655-201ENSMUST00000211321 1284 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 AC110816.1-201ENSMUST00000218559 980 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm26226-201ENSMUST00000082509 116 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm23510-201ENSMUST00000083083 163 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.42□□□□□ -1.7
Chmp2aQ9DB34 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Gm13501-201ENSMUST00000118477 979 ntBASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Mir6374-201ENSMUST00000184003 107 ntBASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Mir6537-201ENSMUST00000184150 110 ntBASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Gm6802-202ENSMUST00000186566 126 ntBASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Gm6075-201ENSMUST00000186816 486 ntBASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Gm29610-201ENSMUST00000187749 453 ntBASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Gm29428-201ENSMUST00000190086 409 ntBASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Gm18183-201ENSMUST00000191024 615 ntBASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Gm4410-201ENSMUST00000199349 686 ntBASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
Chmp2aQ9DB34 Gm44032-201ENSMUST00000204841 166 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms