Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm7834-201ENSMUST00000117560 437 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm13771-201ENSMUST00000117988 238 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 n-R5s30-201ENSMUST00000122624 122 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm10059-201ENSMUST00000131139 171 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm24561-201ENSMUST00000175182 95 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm20673-201ENSMUST00000177167 430 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm29031-201ENSMUST00000185316 614 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm29000-201ENSMUST00000185444 614 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm28204-201ENSMUST00000185934 614 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm28290-201ENSMUST00000186505 614 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm28161-201ENSMUST00000186669 614 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm28749-209ENSMUST00000189599 614 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm33163-201ENSMUST00000194504 614 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm42983-201ENSMUST00000199879 815 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm19596-201ENSMUST00000203685 739 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm3213-201ENSMUST00000219296 441 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc3Q9D6Y1 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Gm5924-201ENSMUST00000132554 871 ntBASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Gm27468-201ENSMUST00000183577 106 ntBASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Gm29356-201ENSMUST00000186935 373 ntBASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Gm43304-201ENSMUST00000196803 326 ntBASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Gm18877-201ENSMUST00000207706 539 ntBASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.19□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Gm24792-201ENSMUST00000104286 128 ntBASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Mir105-201ENSMUST00000104655 80 ntBASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Gm6584-201ENSMUST00000119671 447 ntBASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Gm16318-201ENSMUST00000162402 601 ntBASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Mir3058-201ENSMUST00000175126 91 ntBASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Gm29097-201ENSMUST00000190273 422 ntBASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Gm37050-201ENSMUST00000193464 466 ntBASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 AC131100.2-201ENSMUST00000227701 998 ntBASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Gm5548-201ENSMUST00000055878 397 ntBASIC4.18□□□□□ -1.74
Ccdc3Q9D6Y1 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms