Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm22826-201ENSMUST00000083774 165 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Rnu5g-201ENSMUST00000093721 116 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.85□□□□□ -1.63
Vps28Q9D1C8 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm24124-201ENSMUST00000104103 132 ntBASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm14706-201ENSMUST00000117744 255 ntBASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm14516-201ENSMUST00000120012 252 ntBASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm22383-201ENSMUST00000158188 327 ntBASIC4.85□□□□□ -1.63
Vps28Q9D1C8 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm26915-201ENSMUST00000183080 748 ntBASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm7634-201ENSMUST00000185778 553 ntBASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm18117-201ENSMUST00000187720 742 ntBASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm29148-201ENSMUST00000188140 336 ntBASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm18150-201ENSMUST00000195341 645 ntBASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm3086-202ENSMUST00000221248 310 ntBASIC4.85□□□□□ -1.63
Vps28Q9D1C8 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm22575-201ENSMUST00000082981 110 ntBASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Vps28Q9D1C8 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Gm24715-201ENSMUST00000102377 95 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Gm12261-201ENSMUST00000117499 645 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Gm24960-201ENSMUST00000157923 90 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Gm25520-201ENSMUST00000158389 118 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Mir3058-201ENSMUST00000175126 91 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Gm25534-201ENSMUST00000175365 125 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Mir7222-201ENSMUST00000183740 75 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Gm37070-201ENSMUST00000193272 460 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Vps28Q9D1C8 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Vps28Q9D1C8 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Gm18704-201ENSMUST00000219736 446 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Gm5176-202ENSMUST00000220267 583 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC4.84□□□□□ -1.63
Vps28Q9D1C8 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Snora52-201ENSMUST00000082732 137 ntBASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Vps28Q9D1C8 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Vps28Q9D1C8 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Vps28Q9D1C8 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.84□□□□□ -1.64
Vps28Q9D1C8 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.84□□□□□ -1.64
Vps28Q9D1C8 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms