Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm5263-201ENSMUST00000163646 601 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm8214-201ENSMUST00000172123 351 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm28683-201ENSMUST00000187134 615 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm18177-201ENSMUST00000188373 404 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm28956-201ENSMUST00000189047 427 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm28840-205ENSMUST00000189320 615 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm28835-203ENSMUST00000190062 615 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm29389-201ENSMUST00000191562 352 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm37492-201ENSMUST00000191948 376 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm43494-201ENSMUST00000197672 388 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm43810-201ENSMUST00000201018 232 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm44050-201ENSMUST00000204263 527 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm45026-201ENSMUST00000205292 833 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm7726-201ENSMUST00000206241 231 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm17999-201ENSMUST00000211568 542 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm45777-201ENSMUST00000213009 301 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 AC183092.2-201ENSMUST00000225542 1153 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 AC154484.1-201ENSMUST00000227311 771 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm14794-201ENSMUST00000118181 192 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm3943-201ENSMUST00000118606 718 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm13533-201ENSMUST00000121104 177 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm25433-201ENSMUST00000158283 286 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm19427-201ENSMUST00000183619 208 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Mir6418-201ENSMUST00000185075 115 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm28437-201ENSMUST00000190277 783 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm18181-201ENSMUST00000190670 736 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm5285-201ENSMUST00000193089 666 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm43601-201ENSMUST00000196294 945 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm42509-201ENSMUST00000197390 781 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm44059-201ENSMUST00000204048 351 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm45215-201ENSMUST00000206407 395 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm45658-201ENSMUST00000209197 580 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 AC111046.1-201ENSMUST00000217715 412 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 AC099578.1-201ENSMUST00000220147 435 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 AC155305.1-201ENSMUST00000222207 319 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 AC117202.1-201ENSMUST00000227007 445 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm26439-201ENSMUST00000082592 106 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm23460-201ENSMUST00000083258 109 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Ddx56Q9D0R4 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ddx56Q9D0R4 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ddx56Q9D0R4 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ddx56Q9D0R4 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms