Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm22473-201ENSMUST00000104114 132 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm12311-201ENSMUST00000118803 374 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm14977-201ENSMUST00000121626 812 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm12893-201ENSMUST00000121732 275 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm22819-201ENSMUST00000157445 303 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm3496-201ENSMUST00000188283 745 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm38221-201ENSMUST00000195146 365 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm19269-201ENSMUST00000211401 804 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm7439-201ENSMUST00000214053 835 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 AC156832.3-201ENSMUST00000215591 435 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm8942-201ENSMUST00000217892 400 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 CT009765.2-201ENSMUST00000221331 392 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 AC126253.2-201ENSMUST00000226518 205 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm24319-201ENSMUST00000083389 107 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm43844-201ENSMUST00000202926 5605 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm12231-201ENSMUST00000119447 695 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm12978-201ENSMUST00000121250 522 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm15212-201ENSMUST00000122403 466 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm20428-201ENSMUST00000174365 283 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm28263-201ENSMUST00000185884 400 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm5252-201ENSMUST00000189030 909 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm18747-201ENSMUST00000198129 648 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm33626-201ENSMUST00000206790 828 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm8748-201ENSMUST00000211125 587 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm2059-201ENSMUST00000212025 287 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 AC099612.2-201ENSMUST00000226824 721 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm26072-201ENSMUST00000083135 107 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm25005-201ENSMUST00000083812 156 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Smc1aQ9CU62 AC113059.2-201ENSMUST00000213462 3016 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Gm44283-201ENSMUST00000204461 3950 ntBASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
Smc1aQ9CU62 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Gm11914-201ENSMUST00000117094 507 ntBASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Gm16106-201ENSMUST00000119187 294 ntBASIC5.01□□□□□ -1.61
Smc1aQ9CU62 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Gm16250-201ENSMUST00000148974 256 ntBASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Gm22968-201ENSMUST00000157955 118 ntBASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Gm22940-201ENSMUST00000158560 155 ntBASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Gm3077-201ENSMUST00000165903 627 ntBASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms