Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm14771-201ENSMUST00000118249 203 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm13815-201ENSMUST00000119963 412 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm14907-201ENSMUST00000121948 854 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm22514-201ENSMUST00000122547 308 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm22478-201ENSMUST00000122570 154 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm24719-201ENSMUST00000157520 110 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm23225-201ENSMUST00000158121 114 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm3221-201ENSMUST00000164869 440 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm9006-201ENSMUST00000165520 841 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm10087-201ENSMUST00000167650 330 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm3170-201ENSMUST00000168753 850 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm18199-201ENSMUST00000173820 835 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm3348-201ENSMUST00000177813 850 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm27659-201ENSMUST00000183472 98 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm27781-201ENSMUST00000185185 92 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm29545-201ENSMUST00000188878 694 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm28389-201ENSMUST00000190090 697 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm37609-201ENSMUST00000191778 678 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm20770-201ENSMUST00000193474 694 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm37288-201ENSMUST00000193963 334 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm38008-201ENSMUST00000195333 518 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm44726-201ENSMUST00000203427 217 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm19921-201ENSMUST00000210505 703 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 AC156803.1-201ENSMUST00000224407 820 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm5830-201ENSMUST00000049117 443 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm22807-201ENSMUST00000082737 129 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim8Q99PJ2 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm8202-201ENSMUST00000117682 310 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm15854-201ENSMUST00000118879 808 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm13162-201ENSMUST00000121481 454 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm16412-201ENSMUST00000121602 273 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm15959-201ENSMUST00000121724 368 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm23883-201ENSMUST00000122686 290 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm26349-201ENSMUST00000157530 130 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm23030-201ENSMUST00000158004 273 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Gm10177-202ENSMUST00000161698 207 ntBASIC5.28□□□□□ -1.56
Trim8Q99PJ2 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms