Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm24239-201ENSMUST00000157791 255 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm28920-201ENSMUST00000189957 699 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm35702-201ENSMUST00000198653 511 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm4410-201ENSMUST00000199349 686 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm4734-201ENSMUST00000200117 777 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm18452-201ENSMUST00000202968 1111 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm45458-201ENSMUST00000209900 522 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm18377-201ENSMUST00000215141 607 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 AC079644.1-201ENSMUST00000220586 405 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm46996-201ENSMUST00000220924 408 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm6056-201ENSMUST00000221253 488 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm6049-201ENSMUST00000222369 458 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm26072-201ENSMUST00000083135 107 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm23014-201ENSMUST00000104144 130 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm15994-201ENSMUST00000118029 402 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm13333-201ENSMUST00000119424 781 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm11866-201ENSMUST00000120209 335 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm13788-201ENSMUST00000120767 601 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm14875-201ENSMUST00000120881 319 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm14908-201ENSMUST00000120930 1286 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Mir3110-201ENSMUST00000175053 80 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Mir5110-201ENSMUST00000175537 87 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm28061-201ENSMUST00000189085 807 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm38088-201ENSMUST00000195829 241 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm6057-201ENSMUST00000195927 314 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm8458-201ENSMUST00000196658 819 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm6719-201ENSMUST00000202067 335 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm26814-201ENSMUST00000181178 4149 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nup35Q8R4R6 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm24788-201ENSMUST00000104283 156 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm15752-201ENSMUST00000117427 394 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm23753-201ENSMUST00000157575 149 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Mir1946b-201ENSMUST00000157853 133 ntBASIC3.31□□□□□ -1.88
Nup35Q8R4R6 Gm4222-201ENSMUST00000165784 470 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms