Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm22019-201ENSMUST00000104359 96 ntBASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm13787-201ENSMUST00000120422 168 ntBASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm14563-201ENSMUST00000120571 354 ntBASIC5.8□□□□□ -1.48
Brf1Q8CFK2 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm2855-201ENSMUST00000166765 456 ntBASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Spanxn4-201ENSMUST00000172433 424 ntBASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm18604-201ENSMUST00000172535 558 ntBASIC5.8□□□□□ -1.48
Brf1Q8CFK2 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Mir6344-201ENSMUST00000183462 104 ntBASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm28190-201ENSMUST00000189766 722 ntBASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm28389-201ENSMUST00000190090 697 ntBASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm37088-201ENSMUST00000193887 406 ntBASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm44402-201ENSMUST00000203677 238 ntBASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm17850-201ENSMUST00000210023 1154 ntBASIC5.8□□□□□ -1.48
Brf1Q8CFK2 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Brf1Q8CFK2 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Gm15297-201ENSMUST00000117795 290 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Gm8475-201ENSMUST00000118211 526 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Gm24532-201ENSMUST00000157951 286 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Gm20397-201ENSMUST00000174520 362 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Gm27845-201ENSMUST00000184479 114 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Gm43919-201ENSMUST00000204303 364 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Supt4b-201ENSMUST00000214434 351 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Gm4052-201ENSMUST00000220890 451 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Mir17-201ENSMUST00000083574 84 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Brf1Q8CFK2 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.79□□□□□ -1.48
Brf1Q8CFK2 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Brf1Q8CFK2 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Brf1Q8CFK2 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Brf1Q8CFK2 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.78□□□□□ -1.48
Brf1Q8CFK2 Gm36962-201ENSMUST00000192114 1761 ntBASIC5.78□□□□□ -1.48
Brf1Q8CFK2 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Brf1Q8CFK2 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Brf1Q8CFK2 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Brf1Q8CFK2 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Brf1Q8CFK2 Gm15385-201ENSMUST00000118725 667 ntBASIC5.78□□□□□ -1.48
Brf1Q8CFK2 Gm15854-201ENSMUST00000118879 808 ntBASIC5.78□□□□□ -1.48
Brf1Q8CFK2 Gm6884-201ENSMUST00000119318 615 ntBASIC5.78□□□□□ -1.48
Brf1Q8CFK2 Gm22158-201ENSMUST00000158411 126 ntBASIC5.78□□□□□ -1.48
Brf1Q8CFK2 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Brf1Q8CFK2 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC5.78□□□□□ -1.48
Brf1Q8CFK2 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.78□□□□□ -1.48
Brf1Q8CFK2 Gm26828-201ENSMUST00000180640 172 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms