Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm26320-201ENSMUST00000157742 306 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm25456-201ENSMUST00000157952 109 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm17421-201ENSMUST00000167845 674 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm17086-201ENSMUST00000171346 484 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm13249-201ENSMUST00000177803 345 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm13144-201ENSMUST00000179385 345 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Mir7037-201ENSMUST00000184414 65 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm23925-202ENSMUST00000188429 132 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm29428-201ENSMUST00000190086 409 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm18181-201ENSMUST00000190670 736 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm42824-201ENSMUST00000199361 247 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm45081-201ENSMUST00000206281 572 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm46191-201ENSMUST00000218899 433 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 AC122357.2-201ENSMUST00000220732 1525 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Gm14816-201ENSMUST00000117174 294 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Gm23231-201ENSMUST00000157299 104 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Gm28094-201ENSMUST00000185262 390 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Gm29556-201ENSMUST00000187591 696 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Gm37837-201ENSMUST00000191743 604 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Gm44032-201ENSMUST00000204841 166 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Gm18850-201ENSMUST00000211578 388 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ccdc28aQ8CEI3 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 BC055308-201ENSMUST00000193380 2538 ntBASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Gm24318-201ENSMUST00000104490 131 ntBASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Gm6754-201ENSMUST00000117124 913 ntBASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Gm10241-201ENSMUST00000117664 286 ntBASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Gm14512-201ENSMUST00000117924 230 ntBASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Gm14878-201ENSMUST00000118167 293 ntBASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Gm12486-201ENSMUST00000120887 541 ntBASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Gm17060-201ENSMUST00000172394 824 ntBASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Mir7682-201ENSMUST00000198467 58 ntBASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Gm43895-201ENSMUST00000203219 855 ntBASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 AC153932.1-201ENSMUST00000218558 787 ntBASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Gm42455-201ENSMUST00000199761 2736 ntBASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ccdc28aQ8CEI3 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms