Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 AC152162.1-201ENSMUST00000225910 2917 ntBASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm14688-201ENSMUST00000119169 303 ntBASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm14714-201ENSMUST00000119743 439 ntBASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm12190-201ENSMUST00000120001 187 ntBASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm22314-201ENSMUST00000158007 281 ntBASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm22135-201ENSMUST00000158752 108 ntBASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm27036-201ENSMUST00000182465 980 ntBASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm29428-201ENSMUST00000190086 409 ntBASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm44387-201ENSMUST00000196298 145 ntBASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm42919-201ENSMUST00000197753 1284 ntBASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm44003-201ENSMUST00000203024 490 ntBASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm45498-201ENSMUST00000210346 283 ntBASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Atg4aQ8C9S8 AC131068.3-201ENSMUST00000228438 1456 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Gm37303-201ENSMUST00000194202 1559 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Gm4852-201ENSMUST00000121202 729 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Gm25271-201ENSMUST00000157273 290 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Gm23023-201ENSMUST00000158767 109 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Magea9-ps-202ENSMUST00000167328 899 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Gm4602-201ENSMUST00000203198 308 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Gm44332-201ENSMUST00000203712 433 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 AC174797.4-201ENSMUST00000225510 347 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Olfr480-201ENSMUST00000071658 1029 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Gm25799-201ENSMUST00000082643 107 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Gm22155-201ENSMUST00000083836 162 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Gm44897-201ENSMUST00000206187 1341 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Atg4aQ8C9S8 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Gm11781-201ENSMUST00000118328 472 ntBASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Gm13501-201ENSMUST00000118477 979 ntBASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Gm12788-201ENSMUST00000119090 308 ntBASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Gm5060-201ENSMUST00000120072 599 ntBASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Gm11350-201ENSMUST00000121436 870 ntBASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Gm16250-201ENSMUST00000148974 256 ntBASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Gm4928-201ENSMUST00000219622 850 ntBASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Nsa2-203ENSMUST00000225410 974 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms