Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm25200-201ENSMUST00000083094 130 ntBASIC5.75□□□□□ -1.49
Usp47Q8BY87 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Usp47Q8BY87 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Usp47Q8BY87 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Usp47Q8BY87 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Usp47Q8BY87 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.74□□□□□ -1.49
Usp47Q8BY87 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Usp47Q8BY87 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Usp47Q8BY87 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Usp47Q8BY87 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Usp47Q8BY87 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Usp47Q8BY87 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Usp47Q8BY87 Gm15885-201ENSMUST00000122114 388 ntBASIC5.74□□□□□ -1.49
Usp47Q8BY87 Gm15534-201ENSMUST00000137642 562 ntBASIC5.74□□□□□ -1.49
Usp47Q8BY87 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Usp47Q8BY87 Gm17155-201ENSMUST00000165969 473 ntBASIC5.74□□□□□ -1.49
Usp47Q8BY87 Mir713-201ENSMUST00000178651 108 ntBASIC5.74□□□□□ -1.49
Usp47Q8BY87 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Usp47Q8BY87 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Usp47Q8BY87 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Usp47Q8BY87 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Usp47Q8BY87 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Usp47Q8BY87 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Usp47Q8BY87 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.73□□□□□ -1.49
Usp47Q8BY87 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Usp47Q8BY87 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.73□□□□□ -1.49
Usp47Q8BY87 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Usp47Q8BY87 Gm4736-201ENSMUST00000100870 380 ntBASIC5.73□□□□□ -1.49
Usp47Q8BY87 Mir711-201ENSMUST00000102188 82 ntBASIC5.73□□□□□ -1.49
Usp47Q8BY87 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC5.73□□□□□ -1.49
Usp47Q8BY87 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Usp47Q8BY87 Gm37416-201ENSMUST00000193596 318 ntBASIC5.73□□□□□ -1.49
Usp47Q8BY87 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
Usp47Q8BY87 Gm8745-201ENSMUST00000207846 782 ntBASIC5.73□□□□□ -1.49
Usp47Q8BY87 Gm34272-201ENSMUST00000208886 253 ntBASIC5.73□□□□□ -1.49
Usp47Q8BY87 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.73□□□□□ -1.49
Usp47Q8BY87 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usp47Q8BY87 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Usp47Q8BY87 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Usp47Q8BY87 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Usp47Q8BY87 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
Usp47Q8BY87 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usp47Q8BY87 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.73□□□□□ -1.49
Usp47Q8BY87 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Usp47Q8BY87 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp47Q8BY87 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp47Q8BY87 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp47Q8BY87 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp47Q8BY87 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Usp47Q8BY87 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp47Q8BY87 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC5.72□□□□□ -1.49
Usp47Q8BY87 Gm11718-201ENSMUST00000119942 537 ntBASIC5.72□□□□□ -1.49
Usp47Q8BY87 Gm12900-201ENSMUST00000120919 573 ntBASIC5.72□□□□□ -1.49
Usp47Q8BY87 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.72□□□□□ -1.49
Usp47Q8BY87 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.72□□□□□ -1.49
Usp47Q8BY87 Gm22792-201ENSMUST00000157225 133 ntBASIC5.72□□□□□ -1.49
Usp47Q8BY87 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC5.72□□□□□ -1.49
Usp47Q8BY87 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC5.72□□□□□ -1.49
Usp47Q8BY87 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.72□□□□□ -1.49
Usp47Q8BY87 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.72□□□□□ -1.49
Usp47Q8BY87 Fth-ps3-201ENSMUST00000210405 358 ntBASIC5.72□□□□□ -1.49
Usp47Q8BY87 AC154738.2-201ENSMUST00000227403 1110 ntBASIC5.72□□□□□ -1.49
Usp47Q8BY87 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.72□□□□□ -1.49
Usp47Q8BY87 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp47Q8BY87 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Usp47Q8BY87 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Usp47Q8BY87 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Usp47Q8BY87 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Usp47Q8BY87 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp47Q8BY87 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Usp47Q8BY87 Gm11403-201ENSMUST00000122195 369 ntBASIC5.71□□□□□ -1.5
Usp47Q8BY87 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp47Q8BY87 Gm23098-201ENSMUST00000157552 299 ntBASIC5.71□□□□□ -1.5
Usp47Q8BY87 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC5.71□□□□□ -1.5
Usp47Q8BY87 Gm17829-201ENSMUST00000219782 344 ntBASIC5.71□□□□□ -1.5
Usp47Q8BY87 AC124562.1-201ENSMUST00000224673 337 ntBASIC5.71□□□□□ -1.5
Usp47Q8BY87 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC5.71□□□□□ -1.5
Usp47Q8BY87 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp47Q8BY87 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp47Q8BY87 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp47Q8BY87 AC154462.1-201ENSMUST00000228897 2260 ntBASIC5.71□□□□□ -1.5
Usp47Q8BY87 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Usp47Q8BY87 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Usp47Q8BY87 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp47Q8BY87 Gm24581-201ENSMUST00000103962 133 ntBASIC5.7□□□□□ -1.5
Usp47Q8BY87 Gm24067-201ENSMUST00000104514 85 ntBASIC5.7□□□□□ -1.5
Usp47Q8BY87 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp47Q8BY87 Gm10552-201ENSMUST00000113396 372 ntBASIC5.7□□□□□ -1.5
Usp47Q8BY87 Gm15403-201ENSMUST00000119343 1227 ntBASIC5.7□□□□□ -1.5
Usp47Q8BY87 Mup-ps17-201ENSMUST00000120723 218 ntBASIC5.7□□□□□ -1.5
Usp47Q8BY87 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.7□□□□□ -1.5
Usp47Q8BY87 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC5.7□□□□□ -1.5
Usp47Q8BY87 Ang-ps2-201ENSMUST00000178173 433 ntBASIC5.7□□□□□ -1.5
Usp47Q8BY87 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.7□□□□□ -1.5
Usp47Q8BY87 Gm28997-201ENSMUST00000188759 429 ntBASIC5.7□□□□□ -1.5
Usp47Q8BY87 Gm43424-201ENSMUST00000200484 253 ntBASIC5.7□□□□□ -1.5
Usp47Q8BY87 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp47Q8BY87 AC156504.1-201ENSMUST00000214608 157 ntBASIC5.7□□□□□ -1.5
Usp47Q8BY87 Gm7099-201ENSMUST00000080066 554 ntBASIC5.7□□□□□ -1.5
Usp47Q8BY87 Mir34b-201ENSMUST00000083558 84 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms