Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 AC158511.1-201ENSMUST00000223622 764 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm23927-201ENSMUST00000082466 215 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 AC124746.1-201ENSMUST00000227535 1300 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Mir582-201ENSMUST00000103758 81 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm26376-201ENSMUST00000104784 110 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm23879-201ENSMUST00000116874 126 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm11991-201ENSMUST00000119652 1074 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm14534-201ENSMUST00000120045 357 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm14238-201ENSMUST00000120227 323 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm12854-201ENSMUST00000128518 297 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm24441-201ENSMUST00000157235 281 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm25861-201ENSMUST00000158251 109 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm16125-201ENSMUST00000159003 339 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm6647-201ENSMUST00000170514 641 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm23799-201ENSMUST00000175559 120 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm27818-201ENSMUST00000184536 159 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm29105-201ENSMUST00000187256 450 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm28356-202ENSMUST00000187566 858 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 AC091260.1-201ENSMUST00000216112 229 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 AC121844.1-201ENSMUST00000218706 137 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 AC154506.3-201ENSMUST00000225417 213 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm7665-201ENSMUST00000076710 297 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm26330-201ENSMUST00000082817 104 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm6503-201ENSMUST00000210829 2225 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Gm19131-202ENSMUST00000203464 3208 ntBASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Ubfd1Q78JW9 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Gm19552-201ENSMUST00000194744 2833 ntBASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Gm24715-201ENSMUST00000102377 95 ntBASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Gm23424-201ENSMUST00000103889 110 ntBASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Gm25419-201ENSMUST00000104215 191 ntBASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Gm8145-201ENSMUST00000118220 745 ntBASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Gm13172-201ENSMUST00000118685 256 ntBASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Gm12734-201ENSMUST00000120228 948 ntBASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Gm11909-201ENSMUST00000121424 759 ntBASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Mir5106-201ENSMUST00000174936 73 ntBASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Gm22917-201ENSMUST00000180116 110 ntBASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.92□□□□□ -1.62
Ubfd1Q78JW9 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms