Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Snora81-201ENSMUST00000157310 178 ntBASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm24692-201ENSMUST00000157761 146 ntBASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm24534-201ENSMUST00000157949 291 ntBASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm23806-201ENSMUST00000175157 109 ntBASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm23568-201ENSMUST00000177960 92 ntBASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm24829-201ENSMUST00000179245 92 ntBASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm7952-201ENSMUST00000180540 984 ntBASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm21614-201ENSMUST00000183260 1005 ntBASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm18553-201ENSMUST00000194152 634 ntBASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm3933-201ENSMUST00000195391 439 ntBASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm5694-201ENSMUST00000195648 641 ntBASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm9173-201ENSMUST00000198054 400 ntBASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm43513-201ENSMUST00000199779 1076 ntBASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm44149-201ENSMUST00000204256 226 ntBASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm19880-201ENSMUST00000207731 318 ntBASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Scaf4Q6PFF0 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm14472-201ENSMUST00000119815 282 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm12515-201ENSMUST00000120116 361 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm23542-201ENSMUST00000158208 96 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm23050-201ENSMUST00000158775 165 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm25163-201ENSMUST00000158905 104 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm18808-201ENSMUST00000173316 462 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm24561-201ENSMUST00000175182 95 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm26057-201ENSMUST00000178099 165 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm23619-201ENSMUST00000178411 94 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm21959-201ENSMUST00000178439 452 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm25474-201ENSMUST00000179052 94 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm22047-201ENSMUST00000179176 94 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm37243-201ENSMUST00000193407 595 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm44214-201ENSMUST00000204153 606 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm45189-201ENSMUST00000208567 363 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm8106-201ENSMUST00000213123 523 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 AC152946.2-201ENSMUST00000219071 337 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 n-R5s94-201ENSMUST00000082573 119 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Scaf4Q6PFF0 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Scaf4Q6PFF0 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
Scaf4Q6PFF0 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.46□□□□□ -1.53
Scaf4Q6PFF0 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Scaf4Q6PFF0 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms