Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm6240-201ENSMUST00000208014 473 ntBASIC4.75□□□□□ -1.65
Nup98Q6PFD9 Gm45539-201ENSMUST00000210313 428 ntBASIC4.75□□□□□ -1.65
Nup98Q6PFD9 Gm18120-201ENSMUST00000220079 511 ntBASIC4.75□□□□□ -1.65
Nup98Q6PFD9 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nup98Q6PFD9 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Nup98Q6PFD9 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.75□□□□□ -1.65
Nup98Q6PFD9 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nup98Q6PFD9 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nup98Q6PFD9 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nup98Q6PFD9 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.75□□□□□ -1.65
Nup98Q6PFD9 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nup98Q6PFD9 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Gm13321-201ENSMUST00000117101 400 ntBASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Gm24014-201ENSMUST00000157728 157 ntBASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Gm6625-201ENSMUST00000177870 272 ntBASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Gm44294-201ENSMUST00000205090 728 ntBASIC4.74□□□□□ -1.65
Nup98Q6PFD9 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.74□□□□□ -1.65
Nup98Q6PFD9 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Mir34b-201ENSMUST00000083558 84 ntBASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Nup98Q6PFD9 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Nup98Q6PFD9 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.74□□□□□ -1.65
Nup98Q6PFD9 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Gm23112-201ENSMUST00000158606 125 ntBASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Gm16026-202ENSMUST00000159695 772 ntBASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Gm19596-201ENSMUST00000203685 739 ntBASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Gm45379-201ENSMUST00000211772 549 ntBASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Gm18116-201ENSMUST00000220920 537 ntBASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Nup98Q6PFD9 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Gm23271-201ENSMUST00000104052 124 ntBASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Gm11200-201ENSMUST00000121698 448 ntBASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Gm24998-201ENSMUST00000157908 89 ntBASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Gm28010-201ENSMUST00000179485 126 ntBASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Mir7658-201ENSMUST00000184043 57 ntBASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Gm37241-201ENSMUST00000191736 523 ntBASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Nup98Q6PFD9 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Gm15994-201ENSMUST00000118029 402 ntBASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Gm11281-201ENSMUST00000141391 576 ntBASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Gm23168-201ENSMUST00000157156 143 ntBASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Gm24505-201ENSMUST00000157682 126 ntBASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Gm26005-201ENSMUST00000158802 134 ntBASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Gm27392-201ENSMUST00000185041 101 ntBASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Gm6075-201ENSMUST00000186816 486 ntBASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Gm29563-201ENSMUST00000187249 496 ntBASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Gm43028-201ENSMUST00000202561 481 ntBASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nup98Q6PFD9 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Nup98Q6PFD9 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nup98Q6PFD9 n-R5s201-201ENSMUST00000122622 116 ntBASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Gm3160-201ENSMUST00000128343 607 ntBASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nup98Q6PFD9 Gm37164-201ENSMUST00000192809 637 ntBASIC4.72□□□□□ -1.65
Nup98Q6PFD9 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms