Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm11878-201ENSMUST00000117908 400 ntBASIC4.79□□□□□ -1.64
Herc4Q6PAV2 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Gm17421-201ENSMUST00000167845 674 ntBASIC4.79□□□□□ -1.64
Herc4Q6PAV2 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Gm28859-201ENSMUST00000186650 616 ntBASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Gm37684-201ENSMUST00000192779 355 ntBASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC4.79□□□□□ -1.64
Herc4Q6PAV2 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Gm44002-201ENSMUST00000205134 594 ntBASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Gm45228-201ENSMUST00000206585 352 ntBASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Gm44865-201ENSMUST00000207240 531 ntBASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Gm45458-201ENSMUST00000209900 522 ntBASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Gm3086-202ENSMUST00000221248 310 ntBASIC4.79□□□□□ -1.64
Herc4Q6PAV2 AC164424.1-201ENSMUST00000221690 170 ntBASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.79□□□□□ -1.64
Herc4Q6PAV2 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Gm14854-201ENSMUST00000117758 841 ntBASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Gm15603-201ENSMUST00000119252 492 ntBASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Gm22158-201ENSMUST00000158411 126 ntBASIC4.78□□□□□ -1.64
Herc4Q6PAV2 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Gm28439-201ENSMUST00000187714 876 ntBASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Gm42566-201ENSMUST00000197120 643 ntBASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Gm42643-201ENSMUST00000200504 279 ntBASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Gm9655-201ENSMUST00000211321 1284 ntBASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Gm46327-201ENSMUST00000218240 365 ntBASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Gm4928-201ENSMUST00000219622 850 ntBASIC4.78□□□□□ -1.64
Herc4Q6PAV2 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Gm10794-201ENSMUST00000099624 207 ntBASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.78□□□□□ -1.64
Herc4Q6PAV2 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Herc4Q6PAV2 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Neat1-201ENSMUST00000173672 20771 ntBASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Gm13733-201ENSMUST00000117290 535 ntBASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Gm12311-201ENSMUST00000118803 374 ntBASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Gm14067-201ENSMUST00000119340 314 ntBASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Gm11398-201ENSMUST00000120330 320 ntBASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Gm11965-201ENSMUST00000122017 277 ntBASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Gm14840-201ENSMUST00000122135 594 ntBASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
Herc4Q6PAV2 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Gm24444-201ENSMUST00000157244 308 ntBASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Mir6975-201ENSMUST00000184879 61 ntBASIC4.77□□□□□ -1.65
Herc4Q6PAV2 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms