Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm42520-201ENSMUST00000199642 1502 ntBASIC4.84□□□□□ -1.63
Ccdc88aQ5SNZ0 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Ccdc88aQ5SNZ0 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
Ccdc88aQ5SNZ0 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
Ccdc88aQ5SNZ0 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm11719-201ENSMUST00000119399 351 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm12885-201ENSMUST00000122246 328 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm6075-201ENSMUST00000186816 486 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm5066-201ENSMUST00000188479 822 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm11598-201ENSMUST00000119257 357 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm22383-201ENSMUST00000158188 327 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm7241-201ENSMUST00000159853 357 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm27189-201ENSMUST00000184119 190 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm42983-201ENSMUST00000199879 815 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm17887-201ENSMUST00000200194 547 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm18359-201ENSMUST00000173024 1459 ntBASIC4.83□□□□□ -1.64
Ccdc88aQ5SNZ0 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm26140-201ENSMUST00000103807 110 ntBASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm23084-201ENSMUST00000157850 114 ntBASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm8288-201ENSMUST00000223406 593 ntBASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc88aQ5SNZ0 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm25833-201ENSMUST00000104137 133 ntBASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm23319-201ENSMUST00000104467 131 ntBASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm14991-201ENSMUST00000119913 598 ntBASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm27249-201ENSMUST00000185049 328 ntBASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm37050-201ENSMUST00000193464 466 ntBASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm43717-201ENSMUST00000198684 310 ntBASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 AC118230.1-201ENSMUST00000220196 656 ntBASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm7099-201ENSMUST00000080066 554 ntBASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm24147-201ENSMUST00000082763 144 ntBASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm7381-201ENSMUST00000098958 300 ntBASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 112.2 ms